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Detailed information on CNT30512088


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30174921Juglans regiaVigna angularis12.123.1684.96113forward

Expression of CNT30512088

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MACFSGQNSLPHFLLIPILIPILILILFSPTLKRS*

>peptide 2 (71 aa)
MAVKMGLERLVVTLKSKIRSSLKMKKPYDKIEKSESMRFEIRSRKARKLIEKTLKTADSPKTMIKITSTSA*

>peptide 3 (30 aa)
MLETTTTSIYASWLINSYLFMYVSHCVCMV*

Sequence

>CNT30512088
GGACGCAACTTTTTTCTCAAAGAAAGGAAGAGAAAAACTAGATAGCTCTTAACTATTGCGTGGTCTGCCTTCCAAACCCACCTTATAAATGCTTACATTG
TGACGTCTAACCGTCCGTTACAAATAATATTCATACAAAAATTCACTCTCATGGCTTGTTTCTCCGGCCAAAACAGTCTTCCTCACTTTCTCCTGATCCC
GATCCTGATCCCGATCCTGATCCTGATCCTCTTCTCTCCTACTCTAAAACGCTCTTAAGCTAGCTGGCCAGCTAGCTTGGTCTTTGTTTGTTAATTAGCT
AGCAGCGATGGCCGTGAAGATGGGGTTGGAGAGGTTGGTAGTGACTTTAAAATCTAAAATAAGGTCCAGCTTGAAGATGAAGAAACCTTATGATAAAATC
GAAAAGAGCGAGAGCATGAGATTTGAGATAAGAAGCAGGAAGGCTCGGAAGCTTATTGAAAAGACCTTGAAAACCGCGGATTCGCCAAAGACCATGATCA
AGATCACTAGTACTTCAGCGTAGCTGGTGTACGTTTCTGATCATCATCCAATGCTTGAAACAACAACTACAAGCATATATGCTAGCTGGTTAATTAATTC
ATACTTGTTTATGTACGTTAGCCATTGTGTGTGCATGGTTTAATATACGATCGAGATGCTGATCCGGATTCCCCTCCGCCGGCGGCCTAGCTCTCTGATC
TCATGTCTCTGATCACTCTCCCTTCTTGCGAGTAATTTACTATTTAAATATATATGCGTAAACATTATGCATATATGCAAGGCCTTGTACAACCATATAT
ATATATATTAGGTTTTTAAAATGCTTTAAGATTTTATAGATTTACCAATCATGATTTGATTTCGGTGCATAATTTGGAAATCTTGTTCAACTTTCTCATG
GATTAATTAGCTATTCGTTCAAATTCTATATTAA