Detailed information on CNT30174921


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512088Vigna angularisJuglans regia23.1612.184.96113forward
CNT3020344Vigna angularisCitrullus lanatus20.494.9486100forward
CNT3069623Vigna angularisQuercus suber18.8520.1885.8792forward
CNT30196698Vigna angularisPisum sativum34.2222.6384.43167forward
CNT30488958Vigna angularisOlea europaea24.5922.8685120forward
CNT30565894Vigna angularisActinidia chinensis2516.4986.89122forward
CNT3083861Vigna angularisVigna radiata25.4117.4486.29124forward
CNT30120561Vigna angularisCitrus clementina25.6122.0580.8125forward
CNT30724806Vigna angularisLupinus angustifolius39.3422.9186.98192forward

Expression of CNT30174921

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MVMMGLGRLVGSLKSKIRSLKLKKPYDKMEKSESMRVEIRSRKARKLIEETLKIADSPKSRTFAL*

Sequence

>CNT30174921
GGTATATGCGTGGTTAGCCTTCCATGCTCTTAATGCTTAACATTTCACAGCAATTCTCACATTCAGAAGCAAACACTTGAATTCGTTCATTTCCTTCCTT
TCCCTTTTAACACACAAACACAAACTACTTTGTTCATCATATCACATACCCTTTTCATTCTTCTTTCTACAATAAGTGTAGTTTTGTTTTCATCTTTTTC
TGCATTATCTACCAAGGCACAAGAATTAATCAGCAAAGATGGTGATGATGGGTCTGGGAAGGTTGGTAGGGTCTCTAAAATCCAAAATAAGGTCTTTGAA
ACTGAAGAAACCTTATGATAAGATGGAGAAGAGTGAGAGCATGAGAGTGGAGATAAGAAGCAGAAAGGCCAGAAAACTCATTGAAGAGACCCTAAAAATT
GCTGATTCTCCTAAGTCCAGAACCTTCGCTTTATGATGTATTATTGTTCGCTGTATCTATTGGTGGACCATCCTATACATGGTGCAGG