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Detailed information on CNT3050578


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3038940Cucumis sativusCucumis melo2527.5595.56135forward

Expression of CNT3050578

Peptides detected in this lncRNA

>peptide 1 (31 aa)
ERCKQDRLIDRIIEEQIKASFIPIRIGKSGK*

Sequence

>CNT3050578
GGAAAGATGCAAACAGGACCGATTGATTGATAGGATAATTGAAGAACAAATCAAAGCATCATTTATTCCAATTCGAATTGGAAAGTCGGGGAAATAAACA
TAGTGGGATTCAACAGACAAACCAAAACGTAAAATGGAAAAATAAGAAGGAAAAAAAAAGAGAGAAGAAAAAAATTAAAGGGGGGAAATTTGGTTGAAAC
CACCCAAGTGATGGAGCTTTAAAAAAGGCAAATGTGGTGATGTCGACGTTGTTCTTGCGAGTGATGGGGAAACCAGCGGAAGATTTGAGGCCAGTGAATG
GTGCTACCATGCTAGCTTGAGCAGGGGAAGCACTGTTCACAGAGGCAACAGCGGCGGATGAGAGAATGGATGAAGCCATTTATGCCTCTTTTTTTTCTTG
GAGGATTAGAAGGATTTACTAATAGCTAGTAGAGTAGTTTGAAGAAGCTCTTGGTGTTGAGTCTGAGAGGCATTGCACTGTGAAATGGTAGTCTATTTAT
AAGCTGTTTACTATCCTCATTTTATCCATTCACAAACCAA