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Detailed information on CNT3038940


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508755Cucumis meloSolanum lycopersicum12.2422.569060forward
CNT30153087Cucumis meloPrunus persica11.2223.6189.0955forward
CNT3050578Cucumis meloCucumis sativus27.552595.56135forward

Expression of CNT3038940

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MEFKEMCRILGALVMSLFLRVTGKAAADLRPVNGATMLA*

Sequence

>CNT3038940
ACAAGGAAAGATGCAAATAGGAGCGATTGATTGATAGGATAATTCAAGAACAAATCAAAGCATCATTTATTCCAATTCGAATTGGAAAGTCGGGGAAATA
AACATAGTGGGATTAAACAGACAAACCAAAACGTAAAATGGAAAAATAGGAAAAAAAGAGTAAAGAAAAAAAATTAAAGGAGGGAAATTTGGTTGAAACC
ACCCAAGTGATGAAGCTTTAAAAAAGGCAAATGGTTGAAATTCGCCTCAAGAAAGCCGCAGCATATGGAATTTAAGGAGATGTGTAGAATCTTGGGGGCT
TTGGTGATGTCGTTGTTCTTGCGAGTGACGGGGAAAGCAGCGGCGGATTTGAGGCCAGTGAATGGTGCCACCATGCTAGCTTGAGCAGGGGAAGCACTGT
TGACAGAGGCAACAGCGGCGGATGAGAGAATGGATGAAGCCATTTGATGCCTCTTTTTTTTTTCCCGAGGGTTAGAAGGATTTACTAATA