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Detailed information on CNT30499852


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30403020Coffea canephoraBeta vulgaris5.4628.2198.777reverse complement
CNT30611088Coffea canephoraArabis alpina5.0320.9498.5971forward
CNT30653503Coffea canephoraRosa chinensis5.1728.8510073reverse complement
CNT30205405Coffea canephoraHelianthus annuus5.2433.3310074reverse complement
CNT30342066Coffea canephoraEragrostis tef4.8924.4786.9669reverse complement

Expression of CNT30499852

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MKESDLPSWKLRKVKELKRLKQKMFVENLGHSENRTRDLSHPKRESYH*

>peptide 2 (32 aa)
MFAKSELMVGGIPRIELGTSRTQSENHTTRPNA

>peptide 3 (31 aa)
MCLPLSLLTLFVYLILCPLLAFTHFIICFFP*

Sequence

>CNT30499852
CCAACTTCAGAGTGTGCACCCGCTTATCTGAAGGGTGATTGCGGAAGAGTGGATTATTGATTAAATTCCCACAACAGAGTGAGACAACATTAATGGAAAT
CAATCATCGTACCCTCCGACACACCTCCGCAATTATCTTAATCAGCAGTATCCAGTAGATTCTACTTCCGCCTCCATCGCAACTCCAAGTTAAGATCATT
CTGCAAGTAAGAATGGGATACTCAAATTTCTAATTTTGGCCTTTCGTTTTCTTCATACTGGGCGTTTTCACTTCCTCACCACCTCTCACTCTGCAGAAGA
ATTTGTTCGAGAAGGTAACTCTGCAAGTCATCTCAGCAAAAGGGAAAATTGGAAGCAATGAGAGTAAATTACTAATTTACTAAAGTACTGTGCTTGTTGC
CAGCTATGGAAATGTGTTGAGGTTCAACTATGCCTGATACTTATTTGATCCACAATCTTATCTTGCTTGCTGGAAATTAAGATAAGTCAAAGAACTGGGG
TGATTGAGCAAAAAATTGTTGTAGAATAGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATGCCACTAGACCAAATGCCC
TGCTGTTGACGATGATTGTGTTCCTTTATTGATGAAAGAGAGTGATCTTCCCAGCTGGAAATTAAGAAAGGTCAAAGAACTCAAGCGTCTGAAGCAAAAA
ATGTTTGTAGAGAATTTGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCAGTTGTTGATG
ATTGTTGTGTTCCTTTATCGGTGAATGAGAGTGGTGGTAAGTTTGACTCGTATATAAAAACCTTTTTTCTTTTATTTGGTGCAAAAAAAAAGGAAAAAGA
AAAAGCTGATCCCAATCCCAAGTCCTTGATGTTTTATTCTACGATATACAGTCACTTTTACACGTGTTAAAAGTGAAAGTTAGAGGGCAAATCTAGTAGA
GATCATCTGTAATGACCCGATTGATCTAGAAATGTGTTTGCCTCTATCCTTGCTGACTTTGTTTGTTTATCTTATTCTCTGCCCTCTTCTAGCATTCACC
CATTTCATCATATGCTTCTTTCCTTGACATTGGACCGGAGCATTCATATGCATTCATATGACGGGCTTTGTGGACCTGTCAAGAGAGAATAAAATTTGTC
AACTGTAAAGTGCTTAGAATTAACTTCTGCTACTTCATTCAGAACTATCTATCTACATAAAGGCCTTTTTGTTTGTTTGAGAAATGACAGAGATATGATC
ATGGAAATGCATGTTTGCAAAAAGTGAATTGATGGTGGGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGA
CCAAATGCCCG