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Detailed information on CNT30495547


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30103699Olea europaeaOryza rufipogon4.5626.7288.7162forward

Expression of CNT30495547

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MYLDTSKVGLDWKSKLIRKAVECIHISIAMRIL*

>peptide 2 (86 aa)
MTFPVGEHIRYSPKHLKKIKKMSRFFSDSVFQTLKVSFSIWDNSGDSGALILASLMLQTYPMKPNRSRKKNHHFFISCPKDQNKLA*

>peptide 3 (42 aa)
RLVRDKRENAIVTVHFGGGAFSHLKTKLVSLLFTNKFITVPP*

>peptide 4 (36 aa)
MSMKPCSKGKQQRFSVEISTAHKKTSLNRLVKLDFL*

Sequence

>CNT30495547
AGATTAGTGCGAGATAAAAGAGAGAATGCCATAGTTACTGTTCATTTTGGTGGTGGAGCTTTTTCACACTTGAAAACCAAACTGGTTAGCCTACTGTTCA
CAAACAAGTTCATCACTGTTCCTCCCTAAATATCTTCTTCGTATATATATATTTTTTACCTTCTCTTACACCCTTTTCTAATCTCTATCTTGTTCTATTT
TTTCTTTAACTACGATAACCCAATCAAGAAAATTCAATCATTTCAGTTCAATGTGATCATTTTGAAGACTTCTTTTTTGCATTTGAGCTGGATAAATATG
TCTATGAAGCCTTGTTCAAAAGGAAAACAGCAGAGGTTTTCAGTGGAAATATCAACTGCTCATAAGAAAACTTCCCTAAACCGATTGGTCAAGTTGGATT
TTCTGTGATTTGCGATTATTTGTATTTTCTTATTTTCTTGACTTAGTTAATTTTTTTCATTTTGATCAAATTTTCTTTCTTTTGTATTTTCGTATGTTAT
CTATGTGCTTTTAGATCGGTGTAGTAATCCTAATATCTTTAATCAGCACAAACAAGTATGTATTGTTTGATTTTTGTTTCAAGGGAAGTTCATTATGTTA
TTTTTATGTAATTTTGAGCTGGAGCACGGAGATCCCAAAAACACATAGTTTCTCCTCCAAAAATGACTTTTCCGGTTGGGGAACACATTAGATATTCACC
TAAACACTTAAAGAAGATAAAAAAAATGTCCAGATTTTTCTCAGATTCCGTTTTCCAAACATTGAAGGTTTCTTTCTCAATTTGGGACAACAGTGGGGAC
TCAGGTGCTCTTATTCTTGCTTCCCTTATGCTTCAGACTTATCCAATGAAGCCAAACAGGTCAAGAAAAAAAAACCACCACTTCTTCATATCTTGTCCTA
AGGATCAGAACAAATTGGCATAGTACTACTAAGAATATAGTCGAGATGTACTTAGATACTTCCAAGGTTGGCCTTGATTGGAAGTCTAAACTGATTAGGA
AGGCTGTAGAGTGCATACATATCTCAATTGCTATGAGAATATTATAAATCCTATTGAGAAGATCAATTTTATTGAGAAGGAAAATAAATATTTGAATCTA
ATTAGTCCCTACAAATCACGTCGGTCTTTCTACTATACTATCCCAACACTTACCCACCTCAATCTCCCATCAAGTACTTCATAAAATAGTCCCACTATTT
AGTTTTGATTAATTACATTTGTGTTTAATCTTTGGGATGAACTTACTGGGTTGGTAGTTGCTACTATGATGGGATTCTTATGTGAAAAGATTTTTATATG
AGTTATAAAGATTAAAGATCTAAATTAGCTTGAGCTAATCGTTCTGTTAGGACGTTCAA