Detailed information on CNT30103699


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9BBT1|PSBC_LOTJA, E-value = 1e-50

BLAST vs NONCODE:
NONORUT001181, E-value = 1e-128

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30527931Oryza rufipogonEucalyptus grandis21.551.379250forward
CNT30196209Oryza rufipogonPisum sativum98.7142.888.65229forward
CNT30495547Oryza rufipogonOlea europaea26.724.5688.7162forward

Expression of CNT30103699

Peptides detected in this lncRNA

>peptide 1 (35 aa)
RIVSPPKITSPVGERIRYLPKPVGPWADPTLAPRR*

Sequence

>CNT30103699
AACGCATAGTTTCCCCTCCAAAAATAACCTCTCCCGTTGGGGAACGCATTAGATATTTACCTAAACCTGTGGGTCCTTGGGCAGATCCCACATTAGCTCC
AAGACGCTGATCTCTAACTAGAAAAGTAAATGCTTGAGCTTGAGAAGCTTCTGGCCCAGTAGGTCCATAAAACTCACTCGGATAAGCTGTATTATTGAAC
CAGACAAAACAACAAGCGATAAAACCAAAGAC