Detailed information on CNT30489877


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226590Olea europaeaHordeum vulgare2.5929.991.861reverse complement

Expression of CNT30489877

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MVNKSIFALVENFNVMEMILWRKEDVQDHTIIN*

>peptide 2 (34 aa)
ENLASMGLSPKFCPNFLFDSFIVSEIQINIYPPL*

>peptide 3 (44 aa)
MIQFGKIIKGNDFQANKNLGHEWETIFGFGSVRNSNSEKAIRYT*

>peptide 4 (45 aa)
MLEEGVFYKPDIEVKDIDPLGIELVMGYDWGYLYVPSITIFDQVC*

>peptide 5 (33 aa)
MNSNSSLSSTHLDICFYYIHQLARFEDNAQMHF*

>peptide 6 (52 aa)
MKCFLITYRVVRVSSESEWNICTRLHRWWPCIMNWTGREASIGSHAGGGSFL*

>peptide 7 (47 aa)
MALTRSVDRQLKLKENDSIRKNNKRKRFSSQQKSWPRMGNNIWLRVC*

>peptide 8 (76 aa)
KIWPAWACHQNSVQIFCLIVLLFLKFKLIFTHRCNERIPFIPFTIIFTVSTRGYSEDFIIRFQYIAFLLGFSPIKP*

>peptide 9 (74 aa)
MSFQLFIAWLAIYHLLSQLVSEENSHLFYHQLHHELVHNLIKEQGIVLKIQEFHTILNVMNLISALVDTLCIDE*

>peptide 10 (56 aa)
MSKVKQPNKEIMWFKITDRYIKFSLPELYLVIGLESIGDDDGKKYGKRSSNFSIAS*

Sequence

>CNT30489877
GAAAATTTGGCCAGCATGGGCCTGTCACCAAAATTCTGTCCAAATTTTCTGTTTGATAGTTTTATTGTTTCTGAAATTCAAATTAATATTTACCCACCGT
TGTAATGAAAGGATACCTTTCATTCCTTTCACCATAATCTTTACCGTCTCAACGAGAGGATATTCCGAAGATTTTATCATTAGATTTCAGTATATTGCAT
TTCTTTTAGGATTCTCGCCTATAAAACCCTAATCCCACCCAACGCTCCAAAAAATTTCAATGGCGTTAACTAGAAGCGTCGACCGTCAATTGAAATTGAA
GGAAAATGATTCAATTCGGAAAAATAATAAAAGGAAACGATTTTCAAGCCAACAAAAATCTTGGCCACGAATGGGAAACAATATTTGGCTTCGGGTCTGT
TAGGAATTCGAATTCCGAGAAGGCAATACGCTATACATAGACGTATATGTCTTTAATCCCGTTACTTTTTATCTAGGGCATTGTTTAATTTGTACGTTGA
TTAGGCACTGTTTACCATGTAATTTTACATTGGGGGTGGCTTCAATATGTTCTTACTTATTTGTTAATCCCTTAACTTTTTGAATTACGCTATATTCTAT
ATGGGTTTTCCTCTACTTGGCATCAATTTTCGTTGAACTATGTGAATATGTGTAATACTTCTCTTCTATGCATTATTTCTGATCCTTCTGTAATAGGGCT
GCTTGTTGGGATGTTGCTTTATTCTAATTTTTAGATTTTCTTGCGTTCAAGTTGCAATTGTACTTGTATTGTTTTTCGAAGAAACATTGTGGCTTCTTGT
TCAATTCTATGTATTTAGGTTTTAATTATTTTATCGATTCTCCAGTTATTTGATTTAGTATTTGTTCTTTCCGAAATTAGTTTAAAGATCCATTTTTTAT
TTGTTTTTATGTCTTTTCAACTTTTCATTGCGTGGTTGGCAATTTATCATCTCCTCAGCCAACTGGTTTCTGAGGAAAATAGCCATTTGTTCTACCACCA
ACTTCATCACGAATTGGTACATAACCTGATTAAGGAACAAGGGATAGTTTTAAAGATACAAGAATTTCATACTATATTAAATGTAATGAATCTCATTTCC
GCCTTAGTTGATACACTATGTATTGATGAGTAAGGTTAAGCAACCGAATAAAGAGATAATGTGGTTCAAGATTACCGACAGATACATCAAATTTTCTTTG
CCAGAATTATACCTTGTCATCGGTCTAGAATCAATTGGAGATGATGACGGGAAGAAGTATGGAAAAAGATCTTCAAATTTCAGCATCGCATCCTAGAAAT
TTAGGATTTTAAAAAATGCTGGTGTGAAAGATGTTTTAATCGGCGGAGACGGTGCACCTGACTATGATGCCGTGAAAATAGGCATTTTATACCTGTTTGC
ATCTTACTTGTATGTAACTCATAAAAGAAAATGGTTAACAAATCTATTTTTGCTCTTGTTGAAAATTTCAACGTAATGGAGATGATTTTATGGAGAAAAG
AAGATGTTCAAGACCACACTATCATCAATTAGGAAAGGACTGAAATAGGGCTGGTCACTACCATATGAAATGTTTTTTGATTACATATCGAGTAGTACGA
GTCAGTTCTGAGTCTGAATGGAACATTTGCACAAGACTTCATCGATGGTGGCCCTGCATCATGAACTGGACTGGCAGAGAAGCATCCATCGGTAGCCATG
CTGGAGGAGGGAGTTTTTTATAAACCTGATATTGAAGTTAAGGATATTGATCCTTTGGGTATTGAGTTGGTGATGGGATATGACTGGGGTTACTTATATG
TCCCCTCAATAACCATATTTGATCAAGTATGTTGATGTTGAAGAACACCCGTGCAAAGTCTCAACATGAATTCAAACTCCTCATTAAGTAGCACTCATCT
GGATATATGTTTTTATTACATCCATCAATTGGCAAGATTCGAGGATAATGCTCAAATGCATTTTTGAGTCTAGGTCACCAACTTCCTAGACCTTCCGGCA
CTGGGCAGACATCAGCTCCCATACATGGTCCTACGTGGTAACTTTCAAATTTAGAAAAACTCTAGAATTAATAAAAATGGGCAATCCTGAGCCAAATCTT
GTTTTCCCAAACTAAAGCTTTTCTCTTTTATTCTGTACTAATTGCCGTGGCTTAGTGACATTTTTTGAGTAAGGAGAGGGGTAAGATTAAGGATGTACAT
TCGGCGTGGCTCACATTTTGGAGGTCTAGTTGACATGACTTAAAATTCTTGTTATGTTAGCTGACAGATTAATTTTCTAACGAAAATGATTCCTCCTCCA
ACATTGTTGGGTTGACTCTTTAGTCTTTAACTTCTATGGAGTACTTTGGTG