Detailed information on CNT30226590


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 6e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526003Hordeum vulgarePhaseolus vulgaris59.3112.3699.17121forward
CNT30489877Hordeum vulgareOlea europaea29.92.5991.861reverse complement
CNT30636090Hordeum vulgareCapsicum annuum20.11.6797.5641forward
CNT30646904Hordeum vulgareRosa chinensis97.0671.2289.9198forward
CNT30581628Hordeum vulgareEchinochloa crusgalli95.156.7398.45194forward
CNT30604623Hordeum vulgareOryza punctata46.5745.6794.7495forward

Expression of CNT30226590

Peptides detected in this lncRNA

>peptide 1 (42 aa)
RQKGVAVTRPGRLFTKNTGLRKVVRPCMGADACPVPEGQGSW*

>peptide 2 (29 aa)
TKGGRSDQARATVYQKHRSPQSRKTMYGG*

Sequence

>CNT30226590
AGACAAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCC
CAGTGCCGGAAGGTCAAGGAAGTTGGTGAAGTGATGACAGGCAAGCCGGCGACCGAAGCCCCGGTGAACGGCGGTCGTAACTATAACGGTCCTAAGGTAG
CGAC