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Detailed information on CNT30488170


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30499788Olea europaeaCoffea canephora6.9923.7787.0177forward
CNT30403020Olea europaeaBeta vulgaris7.0828.5788.4678forward
CNT30611088Olea europaeaArabis alpina6.4520.9485.9271reverse complement
CNT30600938Olea europaeaFraxinus excelsior17.8933.3380.2197reverse complement
CNT30653503Olea europaeaRosa chinensis7.0830.8387.1878forward
CNT30214655Olea europaeaHelianthus annuus6.5433.1888.8972forward

Expression of CNT30488170

Peptides detected in this lncRNA

>peptide 1 (36 aa)
FWSQYRENEKKQIFVTLLNITYPVKHLPVIPINNPR*

>peptide 2 (29 aa)
MRNLSTKLLKRFYQITGPLMVHSRKMEIF*

Sequence

>CNT30488170
CATTTTGGAGTCAGTATAGGGAAAATGAAAAAAAGCAAATTTTTGTTACATTGTTAAACATCACATATCCTGTCAAGCACTTACCAGTTATACCAATTAA
CAATCCCAGGTAATGTAATGAGAGGCCATGATGGAGATCAATAAAGATAATTGTGAAAGACTTGCCATTGAGTAGAATAAGAATTATTTTATAATTATTT
AGAGTGATTTACTTTATTCCCTTTCCTTAATTATTAGGTAATGTTCCATATTTTCATCGGGATTTCTGGTATAAGAATGAAGGTGGTTTTTTATTGTTAG
AGGCCTTTTGATTATTGAATAAAATTACAGCACTCTCTCTCCTGGCTATCTATTTTTTCCCTCTCTCCCCCTTCTTTCTCCTCTTCGCTTTTTCCATTCT
TCTACAATTCTCATACAACTCTAAGGTTTGTTCGATTTGGTTCATCCTTCGTCAGGTCAGACTTGTAAAACAGGTTCATGATCCAAGGGACAGAGTAATA
AAATTCAACAGGGCATTTGATCTAGTGGTATGGTTCTCGTTTCGGGTGCAAGAGGTCCGAAGTTCAATTCTCAGAATGCCCCATTTTATGCAATAGTTTA
GTCAGCCACAAAGCACCTTTTTACTTCCTAGTCAAGCAGGACAGATCTGCTTGTAAATAAAAGAATCAAGACAGAGAAAAAAAAAATTTACATCTGAAAC
TGATATTGCATATGCGAAAGCTAGATTTAATAATGTAAAATTTTTAAGACCGTTGTTTCCACACTGGAAAGATAATATACTGTCAATTCAATTGCCTCAA
TAATGTAACATTATGAGGAAACAGTTACTCCCCACTGAACGGTCTATCTATTGACAATTCACTTGCCTGTCTTCTAAGCATAAAATATTTATTGCCCTAC
TGAAAGGTTTAAATATTGTTGATATTATCAGCTCTGGAGTCATCAATACAAAGTTTATGAGGAACCTCAGCACAAAACTGTTGAAAAGATTCTACCAAAT
AACAGGTCCATTGATGGTCCACAGTAGAAAAATGGAAATATTTTAAAACGTGCTTGGGAGTTGTTTTTAAATGGTTTAAATTATAAATAAATAGAAATGA
G