Detailed information on CNT30483233


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1ACH5|PSBB_CHAVU, E-value = 1e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30406228Chara brauniiBeta vulgaris20.7516.0690.9144forward

Expression of CNT30483233

Peptides detected in this lncRNA

>peptide 1 (58 aa)
NKPDKKRLTPKILGKSNAGFPVRSSLKSYKSGKKKKSSKSQYTQCHIAAKKSSPDNIM*

Sequence

>CNT30483233
ATAATAAACCTGACAAAAAAAGATTAACTCCAAAAATTTTAGGCAAATCCAATGCAGGTTTTCCTGTACGTTCATCTCTAAAAAGTTATAAATCTGGAAA
AAAAAAAAAAAGTTCTAAATCCCAATATACCCAATGCCATATTGCTGCTAAAAAAAGTAGCCCTGACAATATAATGTGAACAGATGCACCTCCTTCGTAA
TCAATCCTGAGT