Detailed information on CNT30482165


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1ACH3|PSBN_CHAVU, E-value = 4e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30357898Chara brauniiLactuca sativa21.034.5183.3390forward

Expression of CNT30482165

Peptides detected in this lncRNA

>peptide 1 (36 aa)
NCNFHNYIYILFTRKCHWLRFLYCFWKTFSTTSRSI*

>peptide 2 (41 aa)
IATFITIFISCLLVSVTGYAFYTAFGKPSQQLRDPYEEHED*

Sequence

>CNT30482165
TAATTGCAACTTTCATAACTATATTTATATCTTGTTTACTCGTAAGTGTCACTGGTTACGCTTTCTATACTGCTTTTGGAAAACCTTCTCAACAACTTCG
AGATCCATATGAAGAGCACGAAGATTGACTTATTAAAAGTCTCTACTCTTCCTGGTTAACCAGGAAGAGTAGAACTTGTCAACTTTATTTTTTTGTTTTA
GCAATAATACGAGGCGTTTCTCTAAAAAAGATAGCAAAGAAAATAATTCCAAGGGTACCTACTAAAAGAAAAACCATATCTGGCGCTCTAATTAAAATAG
GAACAAACCAGTTTCCAAACCCACCTATAAGAGCAGGCATTACCATAAAGAGTAGGATAAGATAAGAATGAAAGATAAGATAAGAAGTAAGCACTGCATG
AATAATGTGAGGTCACTTTGATGACGCT