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Detailed information on CNT30479029


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30538901Arabidopsis halleriBrassica napus10054.5188.44320forward

Expression of CNT30479029

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MNYQFLKRSKKVHLLSSIHVSSMIDKTQQAQELGELCCRLPLLFQVLQEAVVVDLHQVREVLLKAKWYFYQLQMILEAGEVL*

>peptide 2 (43 aa)
AKRNVDRFSISPIILFLAADELPVPEEIKEGAPSFFDSRFIND*

Sequence

>CNT30479029
GCTAAGAGGAATGTTGATCGGTTCTCGATTTCCCCAATCATATTGTTCCTAGCTGCTGATGAATTACCAGTTCCTGAAGAGATCAAAGAAGGTGCACCTT
CTTTCTTCGATTCACGTTTCATCAATGATTGATAAAACTCAACAAGCTCAGGAGCTCGGTGAACTTTGTTGCCGCCTCCCGCTCCTCTTCCAAGTGCTCC
AGGAGGCGGTGGTGGTGGACCTCCACCAGGTAAGGGAGGTCTTGCTGAAGGCAAAGTGGTACTTTTACCAGCTCCAGATGATCTTGGAGGCGGGCGAGGT
ACTCTAGGAGGTCGTTTCTC