Detailed information on CNT3047380


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3090025Prunus dulcisSolanum tuberosum23.673.6687.6489forward
CNT30152830Prunus dulcisPrunus persica502.6897.34188forward

Expression of CNT3047380

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MIYETKKKKLKENFCISMEEVKMWKTRQGFSTMIL*

Sequence

>CNT3047380
TTAATAACTCCTCTTTCTTTATTCGTTATTGTAATTTTATTGTAATTTGTAATACATAATGGTAATACATATATGACCAGATGTGTATATGTAGTTAATG
ACTGACCGCCTGTATTTGTACGCGGAGTCCCTAATTAAAATTAAAATGTACAAAATAGATATTTCTACCTGAAATTACTAAAAAATATTAATTTTTTATG
GTAGGTTTCATATTTATTTCATACTTTATATAATATAAGTCTTTTAATATATTATATGTTTGTTATATGATATATGAGACCAAAAAGAAGAAATTAAAAG
AGAATTTTTGTATATCAATGGAGGAAGTAAAGATGTGGAAAACAAGACAGGGATTCTCTACAATGATACTGTAGAC