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Detailed information on CNT30464465


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30365871Saccharum spontaneumSorghum bicolor47.7758.4897.41193forward

Expression of CNT30464465

Peptides detected in this lncRNA

>peptide 1 (39 aa)
SATAPLVLQSTDSGSSTLSSAWYLALSFLSLCGLVLTPR*

>peptide 2 (41 aa)
MIDMSAAAASDTSSSSSAAAAASDVVEAPISAALQEGELAS*

>peptide 3 (71 aa)
LRDGALGSPINGLRQLHVVVGVVPGAELPLPLRLGPDAEVGGAVLLVGEVRPCAAIHSAYIRRVSSSLRSP*

Sequence

>CNT30464465
CCTCCGCGACGGCGCCCTTGGTTCTCCAATCAACGGACTCCGGCAGCTCCACGTTGTCGTCGGCGTGGTACCTGGCGCTGAGCTTCCTCTCCCTCTGCGG
CTTGGTCCTGACGCCGAGGTAGGTGGCGCGGTACTCCTCGTTGGTGAGGTCCGGCCGTGCGCCGCCATCCACTCCGCGTACATCCGCCGCGTCTCCTCCT
CGCTCCGCTCCCCGTAGGAGATGATCGACATGTCCGCCGCCGCGGCGAGCGACACGAGCAGCAGCAGCAGCGCCGCCGCCGCCGCCAGCGACGTAGTGGA
GGCGCCCATCTCCGCCGCGCTACAGGAAGGCGAGCTAGCTAGCTAGGAAGAGGAGGGAGCAGATGGATGGATGAGAGGATGACAGGAGGCTGGAGGTCTC
CCTT