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Detailed information on CNT30450697


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7M0|CB3_ARATH, E-value = 1e-126

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30132048Saccharum spontaneumLolium perenne71.1160.9489.49571forward

Expression of CNT30450697

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MQPSAPSIAHRPWITSSALFRANASGSADSPAVSQP*

>peptide 2 (40 aa)
VCVKNNTLVDKTAYMDTNQLTTKTEHTWMEWKTKTCPVRS*

>peptide 3 (63 aa)
MAWTKKPNMENMARRPFLISLTLSSAKVTGPLMRKPSTRPMRMTWNPSTARMLCACTRLGLPR*

>peptide 4 (30 aa)
MDGMEDQNLSSTLLSSERAQEYLHSFMVQM*

Sequence

>CNT30450697
TTGTGTGTGTAAAAAATAATACTCTAGTAGACAAAACTGCATATATGGACACAAATCAGTTAACAACTAAAACGGAGCATACATGGATGGAATGGAAGAC
CAAAACCTGTCCAGTACGCTCCTGAGTTCTGAGAGAGCACAAGAATATTTGCATTCGTTCATGGTACAAATGTAATGTCACTACACAAACGAGTAGTCTA
CAATGTTCCGGCACGCCGCCGTGTCCGGCTAGCTTAAGACCCTGGCGCGAACTTGGTGGCGTAGACCCAGGCGTTGTTGGCGACGGGGTCGTCGAGGTGG
TCGAGCAGGTTCTCGAGGGGCCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTGA
CCTTGAGCTCGGCGAAGGTGACGGGGCCGTTGATGCGGAAGCCCTCGACGAGGCCCATGAGGATGACCTGGAACCCCAGCACGGCGAGGATGCTCTGCGC
GTGCACCAGGTTGGGGTTGCCGAGGTAGTCCAGCCCGCCCTCGGAGAAGATCTGCGCGCCGGCCTTGAACCACACGGGCTCCTTGAAGTCCACGCGCACC
CACTTCTCGAGCACCTCCGGGGTGATGCAGCCCAGCGCCCCCAGCATCGCCCACCGCCCGTGGATCACCTCCAGCGCCCTGTTCCGCGCGAACGCCTCCG
GGTCCGCCGACAGCCCGGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGGACGGCGTCTGCGCGGAGAAGGGGCCCAGGTACTTGAC
GCG