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Detailed information on CNT30445345


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SDN0|DNJ20_ARATH, E-value = 2e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT301386Saccharum spontaneumZea mays17.1753.3183.42193forward

Expression of CNT30445345

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MKRSAPPGHASGCHRRAARRYAALISSGPAVSSTASTSYIVAALAGAGAAAADTRTRDRRWHLALPK*

>peptide 2 (39 aa)
MKGEKMSTAYIHRIYLELLYTPNSATRGWRFGDWQAKSL*

>peptide 3 (38 aa)
MAIWRLAGEIAVEQRNYSFSSHSIAKEEREKGRKKKST*

Sequence

>CNT30445345
TGTAGTTCTAGAATAGTGGTAGTACTTGAAAAACAATCCCCATTTTGGATTCGAATCGGATGAGAGAGTTGGAATTAAAAAAAAATTGAGCGTATTTACA
CATGAAAGGGGAGAAAATGTCTACTGCTTATATTCACCGTATTTACTTGGAGCTCCTCTACACTCCAAACAGTGCGACGAGAGGATGGCGATTTGGCGAT
TGGCAGGCGAAATCGCTGTAGAACAGCGCAATTACAGTTTCTCGAGCCATTCGATTGCCAAAGAGGAAAGGGAAAAGGGAAGGAAAAAAAAAAGTACTTA
GTACTATCAACTATCCAGGGCCAGCCACCGGCCACGCCGCTACCGGGACGGTTGCGCAGCCGCCCGGCGCATCCTGCTGCCCCAAGTCTCCCCACCGGCG
CGCCCGCGCCGCTCCGCCGCGCGCCACTGCAGCCCGGCCAGCTGCGCCTCCCAGTCGGCGAACCCGTCGCGGCGTGCCGCGCGGTACCCGGCGTCGCCGA
AGTGGGCGCCGCAGCGGAGCTGGACGTCGTAGCCGCGCCTGCGCTCGGGGTCGGACAGCACCTCGTAGGCCTCCCGCGCCGCCATGAAGCGGTCGGCGCC
GCCGGGGCACGCGTCCGGGTGCCACCGCCGCGCGGCGCGCCGGTACGCCGCCTTGATCTCGTCGGGCCCCGCCGTCTCCTCGACGGCCAGCACCTCGTAC
ATCGTCGCCGCCCTCGCGGGCGCGGGCGCGGCCGCGGCTGACACCCGCACCCGCGACCGTCGCTGGCACCTCGCCCTGCCGAAGTAGTACCCCACGCCAA
CGGGCCTCGCGCTCACAGAGGTCATCTTCTTCTTCCTTCCCCGCTCTGCTCTGCTGAGCTAAACCACCACAGACAGCCCGGAAAGTGATGCGTGAACGTG
TAAGCTAGCTACCGAGGAAGATGAAGTAGAAAACGAGTCGCGCGTCTCGCTCTGGCTCTGCAATCGTGGCGCTGAATGACCGGGGACGTGCTGTTTATAT
AGCAGTTGGACAGCGTGAGCGACGAGGTCCTTTCTGTTCTGGAAGGGGCGGAGGCGGGAGGGATAAACGAAGGGCGTCATCGCCCACGGGGAAGCACGGG
TTGTCTGATTTGCGACTCGCTACT