Detailed information on CNT301386


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30445345Zea maysSaccharum spontaneum53.3117.1783.42193forward

Expression of CNT301386

Peptides detected in this lncRNA

>peptide 1 (79 aa)
NNAEIGFEPYVTEWELKVDSTTLQRGGKCLLLLDFKLVCTPNSATRMTCWQEKTLQNSAITASRAIRLSKRKGEGRVVH*

>peptide 2 (47 aa)
MSTASRLQARLHSEQCDEDDVLARENAAEQRNYSFSGHSIVEEERGR*

>peptide 3 (32 aa)
MNYQRPATGDAATRTAARPPGASCCPKPPAPP*

Sequence

>CNT301386
AAACAATGCTGAGATAGGATTCGAACCGTATGTAACCGAGTGGGAACTAAAAGTTGACAGTACTACACTTCAAAGGGGGGGAAAATGTCTACTGCTTCTA
GACTTCAAGCTCGTCTGCACTCCGAACAGTGCGACGAGGATGACGTGTTGGCAAGAGAAAACGCTGCAGAACAGCGCAATTACAGCTTCTCGGGCCATTC
GATTGTCGAAGAGGAAAGGGGAAGGTAGGGTAGTACACTAGTACTACGAAGTATGAACTATCAAAGGCCAGCCACCGGCGACGCCGCTACAAGGACGGCT
GCGCGGCCGCCTGGCGCATCCTGCTGCCCCAAGCCTCCCGCGCCGCCATGAAGCGGTCGGCG