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Detailed information on CNT30443778


BLAST search results

BLAST vs Swiss-Prot:
sp|O65581|ALFC5_ARATH, E-value = 6e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30551343Aegilops tauschiiOryza brachyantha49.6836.7893.07231forward

Expression of CNT30443778

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MARERRCPCTGRGRWPARRRRSPSCRPTS*

>peptide 2 (64 aa)
MVLCCNARPKEKVSVQGLSTTSLFMASRFCVACSSLCPPDRNTTPGTAGGTVRRSAATVYSAITS

Sequence

>CNT30443778
CCACTTATATATCATCAGTAGTTCTGGTTAAATAGGAGAAGGGGAAGGGAGAGAGAATTTAAGTACACGGCAGAAAAGGAAGAGCATATATATCTGCATG
CACGCACGAATCTTGGCGCAATCCATGTGCCGCGCCGTGCGCACGCACACACGGGTTGCACCGAGGTCCTAGGTCCGGGAATGGCGCGGGAGCGACGTTG
CCCTTGCACCGGGCGAGGAAGGTGGCCTGCGCGTCGGCGACGTTCTCCTTCTTGCCGGCCCACTTCTTGATGGTGCTCTGCTGCAACGCCCGGCCGAAGG
AGAAGGTGAGCGTCCAGGGCTTGAGCACCACCAGCTTGTTCATGGCGTCCAGGTTCTGCGTCGCCTGCTCCTCGCTCTGCCCGCCCGACAGGAACACCAC
CCCGGGCACCGCCGGCGGCACCGTGCGCCGCAGCGCCGCCACCGTGTACTCCGCTATCACCTCCG