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Detailed information on CNT30442841


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 1e-92

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30307544Aegilops tauschiiTriticum aestivum10084.08100734forward
CNT30117539Aegilops tauschiiOryza nivara56.435.0688.16414forward

Expression of CNT30442841

Peptides detected in this lncRNA

>peptide 1 (46 aa)
HPEYTYTPEKSIFMCLLAGHKVGGEGPRVVVDRVGEVLSKRLRVVG*

>peptide 2 (57 aa)
YIQSTHILLRSRFSCVYLPGTKLVAKAHALLLTGSARCSANASGSSARPRGSKLPPG*

>peptide 3 (97 aa)
MAQRQWITSSSRFLAKVARGLAGERAEVEHAVGAVPRAVGGGGLGRGLAHGDAAAAAEGVGGSGELDRGGGERHGGGGRHCCRMEQSKLLMCGCRCY*

Sequence

>CNT30442841
TACATCCAGAGTACACATATACTCCTGAGAAGTCGATTTTCATGTGTTTACTTGCCGGGCACAAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTGACAG
GGTCGGCGAGGTGCTCAGCAAACGCCTCCGGGTCGTCGGCTAGGCCAAGGGGGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACGATCTCCCCGAGCGG
GCCACCGGCGACGCGGTACCCCTCGACGGCGCCCATGAGCACGACCTGGCAAGCCCAGATGGCAAGGATGCTTTGAGCGTGGACCAAGCTAGGGTTGCCG
AGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCCGCCTTGAACCAGACTGCCTCGCCGAACTTGACGCCGTTGCGAGCGAGCAGCTCGGGGAAGA
CGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATTACCTCGAGCTCGCGGTTCTTGGCGAAGGTAGCTCGGGGGCTCGCCGGAGAGCGGGCCGA
GGTAGAGCACGCGGTCGGGGCCGTACCACGGGCTGTTGGAGGCGGAGGCCTTGGGCGCGGCCTTGCGCATGGTGATGCGGCCGCCGCCGCCGAGGGCGTA
GGAGGCTCCGGCGAGCTTGATCGCGGGGGAGGAGAGCGCCATGGTGGTGGTGGCCGCCATTGCTGCCGGATGGAACAGAGCAAGCTGCTGATGTGCGGCT
GCCGCTGCTACTGATGGGTGGCTGCGTGAGGAAG