Detailed information on CNT30435801


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30225226Aegilops tauschiiHordeum vulgare3.8524.4795.15103forward
CNT30720731Aegilops tauschiiTriticum spelta83.2100.0999.552228forward

Expression of CNT30435801

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MNAFSSSVSVLSVIRFLFFTSGACLWRNLYRLVLELQPLISF*

>peptide 2 (44 aa)
MTFLPLHVNSPSERELFPASLSAASPHFSPVPSSSPGKPQYPLA*

>peptide 3 (32 aa)
MGKYCWKYALEAIIKWLLLYFLVHDNCLLFML*

>peptide 4 (33 aa)
ERAAAPEPVTLAPAISSHPQPRSSTLAASSSLL*

>peptide 5 (50 aa)
MPCSVGYDSLLIWWIVMLYPHDYVDIMLMHCKCIMLLYHGSAYCIQVNRI*

>peptide 6 (46 aa)
MFACLKDGYRCFGNAFGLVLTFLLCCHAPSCHALLVASVPSYAYAC*

>peptide 7 (80 aa)
MPSPSPPRSTTRRPTGVHLTSSIPQFVAGGPVAAPPLNGRRRPRSLLPPAAAAPLLPGARLPSERKRRPSPTSPACSTWP*

>peptide 8 (50 aa)
MDKAGPLCQLLKPGPATATSLKWKRQPGRTFSLGESVLQYCFRLEYVFLY*

>peptide 9 (46 aa)
MAVDRFCRNAVGLPKWECEAMGSVVWVQCANLCRVYIKSIDSRARG*

>peptide 10 (45 aa)
MTAICPEYCSYTCSIASSWLNACMIALLICSCMVFIVDASGHVML*

>peptide 11 (31 aa)
MIMLISCSCIVNASCYFIMAQHIAFKLTGFN*

Sequence

>CNT30435801
GAGCGAGCGGCGGCACCCGAGCCCGTGACCCTCGCCCCGGCTATAAGTAGCCACCCCCAGCCCCGTTCGAGCACACTAGCAGCCTCTTCCTCCCTCCTCT
AGTCTTGCCTAGCCACTTCCCCGAGCTCGAGGAGCTCCCATTGCCCTCCCATGGCCGAAGCCTCGCCTCGGGTCTCCGCCTAAATTGGCGGCATGCCGAG
CCCCTCCCCTCCTCGTTCCACCACCAGGAGACCCACCGGAGTCCACCTCACCTCCTCAATCCCTCAGTTTGTCGCCGGAGGCCCTGTGGCCGCCCCTCCA
TTGAACGGCCGCCGCCGGCCGCGCTCTCTGTTGCCTCCAGCCGCGGCAGCCCCGCTCCTCCCCGGCGCCCGTTTGCCCTCTGAACGGAAGCGCCGTCCTT
CCCCGACCTCGCCGGCGTGTTCCACTTGGCCGTAGGTGGCCGGAATCGCCAGCGCCCGTCGCCGGCAGCGCCTCTGCTCCGCCTCTGCCTCCTCCCGTTG
CCTTCTCTCCACTCCTCCCCGACGCCTCTTTACCCTCTGGACGGGTGCGCCGTCGTATCCCGCAGCCGCCGGTGCCCTCACCTCGGTCGGAGACGGCCGG
AGTTGGCCGGGCCGGCGCCGGCCTCTTCCCTTCCCTCGCTCCTCTGTCACTGATCGGGGAGGCAGCGAGGAGGAAGAAGACAGGCGCGAGGAGAGGTAGA
TGGATAAGGCGGGCCCCCTCTGTCAGCTGCTCAAGCCGGGCCCCGCCACCGCCACGTCACTTAAGTGGAAGCGTCAACCCGGGCGTACGTTTTCCTTGGG
TGAAAGCGTATTACAATACTGCTTCAGGTTAGAGTACGTTTTCCTTTACTGAAAGCGTATTCCGATCCTTCTTAAGACATGAATGCGTTTTCCAGTTCTG
TAAGCGTATTATCTGTAATACGTTTTCTGTTTTTCACCTCAGGGGCCTGTTTGTGGAGAAATCTTTACAGATTAGTCCTTGAACTTCAACCCCTCATATC
TTTTTAACCACAACTCCAAATGAGGTGAATCCAAAGCCCACTTCTTCGTTTCGTAGAGCCCGTTCTGTTGGTTTCATTTTCACTATGGTTTGACACTGTG
AAAATGACCTTTTTGCCCTTGCACGTAAACAGCCCCTCCGAGAGAGAACTGTTTCCGGCAAGTCTTTCCGCGGCTTCACCGCACTTCTCCCCGGTGCCTT
CTTCATCCCCAGGCAAGCCACAATACCCACTTGCATGATAGTCATGCAGTAGCCATGGTTTTCAACTTGAATATTGAATAAATGTTTGCTTGTTTAAAAG
ATGGTTATCGTTGCTTCGGTAATGCTTTTGGGTTAGTGCTTACTTTCTTGCTATGTTGTCATGCACCTAGTTGTCATGCCCTGCTAGTTGCTAGTGTTCC
TTCATATGCTTATGCTTGCTAGTAGTACATGTTGATGTTGGTGATGGTCTTCGGTGCATGACAGCTATCTGTCCCGAGTACTGTTCTTATACATGTTCTA
TTGCATCCAGTTGGTTAAATGCTTGCATGATAGCACTGTTGATATGTTCTTGCATGGTATTTATTGTTGATGCTAGTGGTCATGTTATGTTATGAGTAGT
GTTGCACTTGTAATATTTATGCTCGTCTCATTATGCCATGTTCAGTTGGATATGATTCATTGTTGATATGGTGGATAGTTATGTTGTACCCTCATGATTA
TGTTGATATCATGCTCATGCATTGTAAATGCATCATGTTACTTTATCATGGCTCAGCATATTGCATTCAAGTTAACCGGATTTAATTGAACTTGAACAAC
TGTTGGCTGAGTCATGGTGTCGCCAGATCGAAACTGACCAGTGCAACCACGCTTACCGTATGGGTAAGGTCCTAACTGGGTCTATTGTCATGCATCTCGC
CGGTGCCTCCCACGAGGGAAGGTTATGGGCGTGCTTACCCTGATCAGGTAGGCAGACATAACCTTGTGTGCTCATTGTTTTTAGTTTTATGGATCCAGTC
CCCGAGAGGGAGTGTTTTGACCACGACGGTGGTCGGGGTGTCTTTGGTAGACACGGGGCCACCCAGGACTAGCCCGTTGGGGATTTGGTCGGAGTGGCCG
GGAGAATGTCATGGCAGTAGATCGGTTTTGTCGAAACGCCGTTGGTCTACCCAAATGGGAGTGCGAGGCCATGGGTTCCGTGGTGTGGGTACAGTGTGCT
AACCTCTGCAGAGTGTATATTAAATCTATCGATAGCCGTGCCCGCGGATAAGGGCCCAGTTCGTGTCGGTCCCACCGTGAGTCAACAGTATTAATAATAA
CTTGATTAATAACAACCCCGGTTTGATGATGAGATAAGTTGGTTGTGATCGCCGTAAGGATCACGGGCCAAATATTGGTCGTGGTTGTGATCGCCGTAAG
GATCACGGTTTGAGACCAAGTGTTGGTCGTGGTTGTGATCGCCGGAAGGATCACGGTGGTATTGAGGATACCGAGTTATTGTATATTCGCGATGTTGTGC
GAGAATCATGGGTAAATATTGTTGGAAATATGCCCTAGAGGCAATAATAAAATGGTTATTATTGTATTTCCTTGTTCATGATAATTGTCTATTGTTCATG
CTATAATTGTATTAACTGGAAACCATAATACATGTGTGAATACATAGACCACAACATGTCCCTAGTAAGCCTCTAGTT