Detailed information on CNT30429177


BLAST search results

BLAST vs Swiss-Prot:
sp|P27495|CB24_TOBAC, E-value = 3e-165

BLAST vs NONCODE:
NONSTUT001352, E-value = 5e-24

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30404043Papaver somniferumBeta vulgaris34.5840.9879.42452forward
CNT3036398Papaver somniferumCucumis melo23.4155.2382.35306forward

Expression of CNT30429177

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MPLGPQQVPRGQNYHQDTEGRRFHLVDRQLLYIPQQHP*

>peptide 2 (60 aa)
MENIASRPFLSSFTFSSANASGSSASPKGSKLPPGYRGSTISPSGPPATLYPSTAPIRIT*

>peptide 3 (52 aa)
MTIMHILTFLEKNWWHMTKHCCSRGQKGGLRGSQEDLFQLQLPERRSQTWRT*

>peptide 4 (34 aa)
MRCPNLQSKWMYRVYMSETEENQTSSPLKEMISS*

>peptide 5 (42 aa)
MMGMRETWMPFICFVKEKIRRLLKKVFWWCCLMSYTDRVHVSF

Sequence

>CNT30429177
TGATAAGTTTATGTCGACAAGATCAATTCCAAGTGGGTGCCTAGGAAAAAGCAGCAAACATTTTGCTGTCTGAAAATTTGGTTGGATTTCTTGCTAGAAA
CATGTAGGCTTTCACTTCGAATGACATGCACCATATGGCATATGAAGTCTGTAACTGAAAGTAGATACCATGTTTTGCTAAACAGATCTGATAGACATAT
TACTTGACAAATTATTTTCATTGCTCAAAATTTGAGTTTGAGGTTCCAAATAGACATGTGAAACGTACACAGATGCGCTGCCCAAATTTACAATCTAAAT
GGATGTACAGAGTATATATGAGTGAAACAGAAGAAAACCAAACTAGTTCGCCTTTAAAGGAAATGATATCATCGTAGATGACTATCATGCACATTCTCAC
TTTCCTGGAGAAAAATTGGTGGCATATGACCAAGCATTGTTGTTCACGGGGTCAGAAAGGTGGTCTGCGAGGTTCTCAAGAGGACCTTTTCCAGTTACAA
TTGCCTGAACGAAGAAGCCAAACATGGAGAACATAGCAAGTCGCCCATTTTTAAGTTCCTTTACCTTTAGCTCTGCAAATGCCTCTGGGTCCTCAGCAAG
TCCCAAGGGGTCAAAACTACCACCAGGATACAGAGGGTCGACGATTTCACCTAGTGGACCGCCAGCTACTCTATATCCCTCAACAGCACCCATAAGGATA
ACTTGAGTGGCCCAAATCGCCAAGATGCTCTGAGCATGAACTAAGCTGGAGTTTCCCAAGTAGTCAAGTCCACCTTCGCTGAAAATCTGAGAACCAGCTT
TGAACCAGACTGCTTCTCCAAAATTAACTCCATTTCTAGAGAGAAGTTCAGGGAAAACACATCCCAAAGCGCCAAGCATGGCCCACCTGGAATGAATCAC
TTCCAATTCCCTGTTCTTGGCAAAGGTCTCTGGGTCTGCAGATAGTCCAGCAGTATCCCAACCATAATCACCAGGGAATTCACCAGTTAGGTATGATGGA
GACTCGCCAGAGAAGGGTCCAAGGTACTTGACACGGTCTGGACCGTACCATGGACTTCCTGAAGAAGCAGCAGGCTTCTTTGCTGATGTCTTCCTCATCA
CAATCATTCCATTGCTACTGGATCTAACATTGGTGGGGAATTTCGATTGTGCATTCAAAGTTACAGCTGTGCCTGCAAATGATGGGGATGAGAGAGACAT
GGATGCCATTTATATGTTTTGTTAAAGAGAAAATAAGAAGACTGCTGAAGAAGGTATTTTGGTGGTGTTGTTTGATGAGTTACACTGATCGAGTTCATGT
CTCTTTT