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Detailed information on CNT30429028


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30499788Papaver somniferumCoffea canephora6.6224.6910080forward
CNT30403020Papaver somniferumBeta vulgaris6.5428.9498.7379forward
CNT30611088Papaver somniferumArabis alpina5.8820.9498.5971reverse complement
CNT30653503Papaver somniferumRosa chinensis5.9628.4610072forward
CNT30214655Papaver somniferumHelianthus annuus6.1334.110074forward
CNT30342066Papaver somniferumEragrostis tef5.7124.4786.9669forward

Expression of CNT30429028

Peptides detected in this lncRNA

>peptide 1 (56 aa)
ISVSGQWVMESIKGYSAENHNTAVSQSAISATAVAQIHILTTIIQLVAVTRHPRFI*

>peptide 2 (56 aa)
MILALGARGPEFDSRNAPILIPYFFLLFFVFPIHECRKEDWNKIEISRGRNSLRKS*

>peptide 3 (61 aa)
MVANKGSLCLWAALHPSLSTNKMLQHRGIQLNSYLCILCYSIVEDPDRFFLRREYSWQTWG*

Sequence

>CNT30429028
ATTTCTGTCAGTGGCCAGTGGGTAATGGAGTCAATCAAGGGATATTCTGCAGAAAATCATAATACTGCAGTGTCTCAAAGCGCCATTTCAGCTACTGCAG
TTGCTCAGATTCATATATTAACTACAATAATTCAGCTCGTGGCAGTAACTCGGCATCCCAGGTTCATTTGAACAGCAACTTCTATACAGTTTCTAGCTCT
CTCTCTCTCTCTGTGCAGCAGCGTCTAATTCAGTATGACGATGCAACAGCAGCCGCTCAGATTCATACAACAGCAATGGCTCAGCTCCTGGCAGTAACTC
AGCAGCACAGATTCATATCAGCAGGTGCTTCCAAGCGTTTCTAGTTCTCTTGTAGTAGCAGTGTTTAGCTCGAGGTCTGGTGGTACTATTGAAGGGTCTT
TTCACTCGTTTGATTTGGAAAAAATGGTTGCTAACAAAGGTTCTTTGTGTCTGTGGGCTGCTCTTCATCCAAGTCTGTCAACTAACAAGATGTTACAACA
TAGAGGAATCCAGCTAAACTCATATTTGTGCATTCTTTGCTACTCAATTGTCGAGGATCCTGATCGTTTCTTCTTACGTCGCGAGTATTCTTGGCAAACT
TGGGGTTAGTGTTGTCTGTAGATATTGATCCCGAGTATGGTTAGTATCAACACAGTTACTCGCATTGCATAGTTCTGAGAATCTGACTTCATATTCATTG
TATGCCCTGGTTTGAAGTCTTTGGCTTTTGCTTGAAATTGATGTGATTTGACTGAGAAGCTGAGCATAGAAGTTCCAAGGCGGCTCTCTTGGGATCAGGT
GGACCTCTAATTCGAACATCAAAGATAAATTCTGTCTAATACATCAACTGGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCGA
GTTCGATTCTCGGAATGCCCCTATCCTAATTCCGTATTTTTTTCTTCTTTTTTTTGTTTTTCCAATACATGAATGCAGAAAAGAAGATTGGAACAAGATT
GAAATTTCAAGAGGTCGGAACAGTTTAAGGAAATCATAAACTTTACTGATAATTTTTTTTGTTAATTAAGTCGATTGGGAGCTAAATCAATTGAAAATAG
AGTCTGCAGTGCAGTTAACTGATCAGTACTCAATTGAAAATTGTGTGCATTATTAGTATCTTCTACTCAGGCAAGTAGAGTGCACGTGCGTTGCACGTCA
TAAGCTGA