Detailed information on CNT3042813


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43191|LOX15_SOLTU, E-value = 2e-117

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30704118Prunus dulcisPrunus avium90.2470.7494.07573forward
CNT3031084Prunus dulcisTheobroma cacao48.3561.7783.71307forward

Expression of CNT3042813

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MAFLYKLLPPGLEFGVFLNYVISLVVERAIVFNPSFNCKPDFNPINGIWIVLDQ*

>peptide 2 (35 aa)
PQFQPVSFQIYQRLSMVLCLLSIQECLSAPNTLHQ*

>peptide 3 (38 aa)
LNFSQFLSKFIKGFQWFCVCCPFRSVSLPQIHFISRMP*

>peptide 4 (43 aa)
MMIVHVSTRSSRVCILGHQGSSFLSPWPSSTSSFHQDWSSVSS*

>peptide 5 (52 aa)
SISASFFPNLSKAFNGSVSVVHSGVSLCPKYTSSVECLDRISIRAMPSTVCS*

Sequence

>CNT3042813
CCTCAATTTCAGCCAGTTTCTTTCCAAATTTATCAAAGGCTTTCAATGGTTCTGTGTCTGTTGTCCATTCAGGAGTGTCTCTCTGCCCCAAATACACTTC
ATCAGTAGAATGCCTTGACAGAATTTCAATAAGGGCAATGCCAAGCACTGTCTGCAGCTGAGCGGTAATTGTTTTCAAGAAAACTGTATCAGGGCTGGAT
TCGAGCTCTTTGTACTCAGGAGTTCCCTTCTCAGGCATGAATTTTCGGCTTATAGTAGGGCGGTTGGGGAGGTATCCTGCATAAGGGTACTGTCCAAAGT
TGACGGCTGCATGGAGAGCAGAAGCAGTCCATATGATGATAGTGCATGTTTCGACTAGGTCTTCGCGAGTCTGCATTTTAGGCCACCAGGGCTCATCTTT
TTTGTCACCATGGCCTTCCTCTACAAGCTCCTTCCACCAGGATTGGAGTTCGGTGTCTTCTTGAATTATGTCATCAGTCTTGTAGTAGAAAGAGCAATAG
TCTTCAACCCAAGTTTTAATTGCAAACCAGATTTCAATCCCATCAACGGCATATGGATAGTCCTCGATCAGTAGGCGAAGACCATGTGGAGAATTTGCAT
CCTTGACTGCAACTCCTCTGTATTGATCAAAGGCA