Detailed information on CNT30408444


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONVVIT000851, E-value = 3e-56

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30404368Papaver somniferumBeta vulgaris20.288.3789.0473reverse complement

Expression of CNT30408444

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MVIGSRTQGDLRVRRGRENASSQCPITRRYSAEVTHAIL

>peptide 2 (43 aa)
GSTRASRCGRSGSENVGLSNANIGEKSMPRKPKGSSVRFVHRG*

Sequence

>CNT30408444
GGAAGCACCCGCGCGAGCAGGTGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAAATCAATGCCCCGAAAACCTAAGG
GTTCCTCCGTAAGGTTCGTCCACAGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCC
TTGTTGGTCCTGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACGCAAGGTGACCTTAGGGTAAGAAGGGGTAGAGAAAATG
CCTCGAGCCAATGTCCGATTACCAGGCGCTACAGCGCTGAAGTAACTCATGCCATACTCC