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Detailed information on CNT30404032


BLAST search results

BLAST vs Swiss-Prot:
sp|P12333|CB2A_SPIOL, E-value = 2e-152

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30269346Beta vulgarisChenopodium quinoa50.2467.1485.47523forward

Expression of CNT30404032

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MGLGFPAVFLMVILPSPRISEGVGPNLMGFPAREGEESAIVEEAIFFEKKK*

>peptide 2 (35 aa)
MGPHLKMGLSILHGLGRTMGFLMKWAWAFQLSSSW*

>peptide 3 (29 aa)
MAQRQWITSSSRFLAKVSGSAESPAVSQP*

Sequence

>CNT30404032
AGCTTTTCCATTCAAATTTACTCTCACGACCTCACTTATTACTAATTCTTACTTAAACTCGAGTCTTGACTGAACCAAACTAATAATCAACTAACGTTCA
TACACTTAATCAAACCACAATGTTAATTAATCAAACCACAATATATAAATTAACGACGAAAATTTTCACAAAATATCAAGAGTGAGTCCCATGATTAGCA
CACAAAATACTCAATACATTAATCCATTCCATAATTTACATTAAAAAGCAATTGAAATTGAAAAGTGTCAAACATTTTTTTTTTTTCTCAAAAAACACTT
CACTTTCCAGGGACAAAGTTTGTAGCATAATTCCATGCATTATTGTTAACTGGGTCAGCAAGGTGGTCAGCAAGATTCTCAATTGGGCCTTTTCCAGTAA
CAATAGCTTGAACAAAAAATCCAAACATTGAAAACATAGCCAATCTACCATTCTTAATTTCCTTAACTTTCAACTCAGCAAAAGCTTCTGGATCATCAGC
AAGAATACTTTGTGCATGGACTAAACTTGGGTTACCCAAATAATCAAGCCCACCTTCACTAAAGATTTGTGATCCAGCTTTAAACCAAACTGCCTCACCA
AATTTAACACCATTACGGGCCAAAAGTTCTGGGAAAACACAGCCCAATGCACCTAACATGGCCCAACGACAGTGGATCACTTCAAGTTCACGATTTTTAG
CAAAAGTTTCTGGATCAGCTGAAAGCCCAGCAGTATCCCAACCATAATCACCAGGAAATTCACCAGTAAGATAAGATGGGGCCTCACCTGAAAATGGGCC
TAAGTATTTTACACGGTCTGGGCCGTACCATGGGCTTCCTGATGAAATGGGCTTGGGCTTTCCAGCTGTCTTCCTCATGGTAATTCTTCCCTCACCAAGA
ATTTCTGAGGGTGTTGGGCCTAACTTGATGGGCTTTCCAGCAAGAGAAGGAGAAGAAAGTGCCATTGTTGAGGAAGCCATTTTTTTTGAAAAAAAAAAGT
GAGGAGAGAGAAAAATTTATGATAGTTGTGCTATAAGTGAT