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Detailed information on CNT30395556


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 2e-44

BLAST vs NONCODE:
NONSTUT000620, E-value = 2e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30686644Triticum turgidumTriticum urartu90.4493.1899.171570forward

Expression of CNT30395556

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVSVFTKICICKEE*

>peptide 2 (46 aa)
MDKLLWQQHIFSFKDINDHRSMYVTQKSTDYIDLTIPHSCQNMLII*

>peptide 3 (60 aa)
MKTIFGSKPNYSLRPIRTITSDRPRSPRVYRKFYMAYKFYVLLGRIYQNIRDHTSSRNPS*

>peptide 4 (38 aa)
MYYLGESIKTYETTRHQGIHPDLPIQYELAYAKSLRIR*

>peptide 5 (44 aa)
MVSIKEADRQTHNDRTTNTNAWTSFYGSSIFFHLKILMTIGPCM*

>peptide 6 (35 aa)
MPSCTSRLSIFSRICICWACYQDENHLRVKTKLQS*

Sequence

>CNT30395556
CGGGTTTTGAATTAAGTGTACAACTATGTTTAAAACGCCATGATCAGAAGCTGTGGTGGGTGTACAGATTGACTCTTATTACATGACTATTCCTAAGATT
GATTCTGATTGGGTTAGGGGCATGTGATTTTGTTCTCCCGGTGCAACGCACGGGCCCTTTTGCTAGTTCATTACTTAAGGATACTGCTGTGCCAGCAACG
GTTTCAACCAACATAACATGGGGACTCGATAGTTTTCAAACCAACACATAGGACTGACACAAACGAGAAAACAGTTCAAACGATCGACAGGGCACCACCA
ACCGGACGACCAAGGATAAACCAGCAGGTACAACGCCAGGACAATTACTGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGT
TGTAGTCAGCGAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT
GACATTGTCGATGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGTGTCTTCACAAAGATCTGCATCTGCAAAGAAGAATAACAGATA
GGATGGTAAGCATAAAAGAAGCAGATCGGCAAACTCACAATGATAGAACAACAAATACTAATGCATGGACAAGCTTCTATGGCAGCAGCATATTTTTTCA
TTTAAAGATATTAATGACCATAGGTCCATGTATGTAACACAAAAGTCTACAGATTACATTGATCTAACGATTCCACATAGCTGCCAAAACATGCTTATTA
TCTAAGAGAAACCTAGCTTCAGGGTAATACATCAAGCACATCTGACACTAATGTACATGAGCTTCAGGAAAAAAACAATCTACAATCCTAGGCCTATTAG
GACGATCTTGGTACAACAGCAATGTGATAAATAGCAACAGCTCAGGCAGGATCCGCATGTGGAGAAAAAATTATCACACAGCTACTAATTTGGATGATAA
AAGATTTACCAAGCCTGAACGGAACTGTAATAGATGAAACATGCATAGATTAACATATGAGACCATATGGCATCAGGAATTCACCTGGAAGAGCGGATAG
ACCTAACCCTTTCAGTAAAAATTAGGAAATAAACACAAAAGCTTAACCAATCTAACAACGCAAATAGATAAGCTTATACATCAAGCCAGAGACTCAACAG
ACATATTTTCTTCTTCAAAGAGATACCAGCGAGCAAATAGGTTCATGCCTTCATGCACATCTAGACTATCAATTTTCTCACGGATTTGCATATGTTGGGC
ATGTTATCAGGATGAAAACCATCTTCGGGTCAAAACCAAACTACAGTCTTAGGCCTATTAGGACGATCACGAGCGACAGACCACGCAGTCCACGCGTCTA
CAGAAAATTTTATATGGCATACAAGTTTTATGTACTACTTGGGCGAATCTATCAAAACATACGAGACCACACGTCATCAAGGAATCCATCCTGATCTACC
CATTCAATACGAATTAGCATACGCGAAATCCCTACGAATTCGCTAAATCTTCACCGATCTATAACAACAGATCGGAGCCAAATTCCACAGTACCACGCGT
CCAACGAGAGCACCACGGAAACGTAGATCCAGACGATACAGGGAGAAGAGGGGAAGGAATCGCCGTACCTTGAGGCGGTGGGGAAGGAGGATTCGACAAG
CCTCGAGTCGATCGGAGACGAGATTAGCTTGGGATT