Detailed information on CNT30686644


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 1e-44

BLAST vs NONCODE:
NONSTUT000620, E-value = 2e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30189185Triticum urartuSecale cereale28.4391.9491.02479forward
CNT30303670Triticum urartuTriticum aestivum28.319094.13477forward
CNT30395556Triticum urartuTriticum turgidum93.1890.4499.171570forward

Expression of CNT30686644

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MDKLLWQQHIFSFKDINDHRSMYVTQKSKDYIDLTIPHSCQNMLII*

>peptide 2 (48 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVSVFTKICICKEE*

>peptide 3 (43 aa)
MSFRKKTIYNPRPIRTILVQQQCDKEQQLRQDPHVEKKLSHSY*

>peptide 4 (44 aa)
MVSIKEADRQTHNDRTTNTNAWTSFYGSSIFFHLKILMTIGPCM*

>peptide 5 (35 aa)
MPSCTSRLSIFSRISICWACYQDENHLRVKTKLQS*

>peptide 6 (38 aa)
MYYLGESIKTYETTRHQGIHPDLPIQYELAYAKSLRIR*

>peptide 7 (60 aa)
MKTIFGSKPNYSLRPIRTITSDRPRSPRVYRKFYMAYKFYVLLGRIYQNIRDHTSSRNPS*

Sequence

>CNT30686644
ATTCAAGCACGATACAGAACCAACAGCAAATTAGCGCAAGCAGATTTATCTGAAGTTCACTTATTCATTACTTAAGGATACTGCTGTGCCAGCAACAGTT
TCAACCAACATAACATGGGGACTCGATAGTTTTCAAACCAACACATAGGACTGACACAAACGAGAAAACAGTTCAAATGATCGACAGGGCACCACCAACC
GGACGACCAAGGATAAACCAGCAGGTACAACGCCAGGACAATTACTGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGT
AGTCAGCGAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC
ATTGTCAATGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGTGTCTTCACAAAGATCTGCATCTGCAAAGAAGAATAACAGATAGGA
TGGTAAGCATAAAAGAAGCAGATCGGCAAACTCACAATGATAGAACAACAAATACTAATGCATGGACAAGCTTCTATGGCAGCAGCATATTTTTTCATTT
AAAGATATTAATGACCATAGGTCCATGTATGTAACACAAAAGTCAAAAGATTACATTGATCTAACAATTCCACATAGCTGCCAAAACATGCTTATTATCT
AAGAGAAACCTAGCTTCAGGGTAATACATCAAGCACATCTGACACTAATCTACATGAGCTTCAGGAAAAAAACAATCTACAATCCTAGGCCTATTAGGAC
GATCTTGGTACAACAGCAATGTGATAAAGAGCAACAGCTCAGGCAGGATCCGCATGTGGAGAAAAAATTATCACACAGCTACTAATTTGGATGATAAAAG
ATTTACCAAGCCTGAACGGAACTGTAATAGATGAAACATGCATAGATTAACATATGAGACCATATGGCATCAGGAATTCACCTGGAAGAGCGGATAGACC
TAACCCTTTCAGTAAAAATTAGGAAATAAACACAAAAGCTTAACCAATCTAACAACGCAAATAGATAAGCTTATACATCAAGCCAGAGACTCAACAGACA
TATTTTCTTCTTCAAAGAGATACCAGCGAGCAAATAGGTTCATGCCTTCATGCACATCTAGACTATCAATTTTCTCACGGATTTCCATATGTTGGGCATG
TTATCAGGATGAAAACCATCTTCGGGTCAAAACCAAACTACAGTCTTAGGCCTATTAGGACGATCACGAGCGACAGACCACGCAGTCCACGCGTCTACAG
AAAATTTTATATGGCATACAAGTTTTATGTACTACTTGGGCGAATCTATCAAAACATACGAGACCACACGTCATCAAGGAATCCATCCTGATCTACCCAT
TCAATACGAATTAGCATACGCGAAATCCCTACGAATTCGCTAAATCTTCACCGATCTAACAACAGATCGGAGCCAAATTCCACAGTACCACGCGTCCAAC
GAGAGCACCACGGAAACGTAGATCCAGACGATACAGGGAGAAGAGGGGAAGGAATCGCCGTACCTTGAGGCGGTGGGGAAGGAGGATTCGACGAGCCTCG
AGTCGATCGGAGACGAGATTAGCTTGGGATTTGTTGGTTCCGTTGCTGGGAGCGGTGGTGAGGATTGGAGGGGGGGAGGGGGTGG