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Detailed information on CNT30392169


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30721471Triticum turgidumTriticum spelta32.4375.61100310forward

Expression of CNT30392169

Peptides detected in this lncRNA

>peptide 1 (50 aa)
QKKEKLALRLLLSYHSRWLNIENTTPHTREFTHGAYTKYTHTHPSLASMQ*

>peptide 2 (30 aa)
MERTQSTHIHTHHSLACSEQTGIRKESYKH*

>peptide 3 (81 aa)
MAASQKLLSTLSSSSADGSYLAVVAPGVENAPPHAAAARGRRRRRRHRRGRGRRHRRRLLNRLPCSCTSTNTHVNHHQFTQ*

Sequence

>CNT30392169
CCAGAAAAAGGAAAAGCTTGCTCTGAGGCTGTTATTGTCTTACCATAGTAGGTGGTTAAACATTGAGAACACCACACCACACACACGAGAATTTACACAT
GGAGCGTACACAAAGTACACACATACACACCCATCACTCGCTAGCATGCAGTGAGCAGACCGGGATAAGAAAAGAAAGTTACAAGCACTAGTAGACAGTA
GTACGAAGCTCAAGACAAACCACATGCAGCCTCGGACGGCAACGTACGCTATGCAGGATTAGATAACCAAAAGAGCAGCAAACATGGCGGCGTCGCAGAA
GTTGTTGAGCACCCTCTCTTCTTCTTCGGCCGACGGCTCTTATTTAGCGGTGGTTGCTCCCGGGGTGGAAAACGCTCCGCCACACGCTGCCGCCGCGCGG
GGGCGTCGACGACGACGGCGTCACCGGCGTGGTCGGGGTCGTCGGCATCGACGGCGACTGCTTAATCGCCTCCCCTGCAGCTGCACCTCCACCAACACCC
ATGTAAACCACCATCAGTTCACACAATGAACCCAATAGATCCTCCGCTTAAACATCAAATCTTCTTCTGAAAACCACTGGTGCTAGACTGACCGCTAGTT
CTTACGCCCGTCTCCGGGCGAGGCCCGGCCACCACGTCGTCCCACAGCTTGTCCAGCATCTTGCGCAGAAGTTGGATCTGATCGGTGCAAGAACTTGTGT
CACTCGCTCGTACTACTACCCACCGATAAGATCAAGTGCACTGGCCGACTGAGTTAGGTGAGACTGGGGGCACTTAAATCATGCAGCGACGGAGATGCGC
TCACCGTCGGGTTGTGTCACCGCTCTAGATCACAGACGGACACCTGTACACATACGGCTAGTGTCCAACACAGTGTACTAGCAAATGAAGGATCGGACCG
GGGTGTGGCGTGGCCTCTTGGAAATCGCGGTGCCGGTGAGGTTAGCTTGTTTTGAC