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Detailed information on CNT3038463


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30716591Cucumis meloMalus domestica golden31.3626.6884.28159forward

Expression of CNT3038463

Peptides detected in this lncRNA

>peptide 1 (70 aa)
NSYSFYIMHFAKMAFSLFWFWIILKISITNPLYILVFLTIHSFLLNRLCYGNTHMVVHKNNSENSIRLIF*

>peptide 2 (29 aa)
QFVFFLYYAFCKNGLLSLLVLDNFENLHY*

>peptide 3 (32 aa)
MRISIQCISTLFSKKSGRSLCLNESHVEILIIH

Sequence

>CNT3038463
TCAATTCGTATTCTTTTTATATTATGCATTTTGCAAAAATGGCCTTCTCTCTCTTTTGGTTTTGGATAATTTTGAAAATCTCCATTACTAATCCTTTGTA
TATCTTGGTGTTTCTAACCATCCACTCATTTTTGCTCAATCGGCTGTGTTATGGTAATACACATATGGTAGTACATAAAAATAATAGTGAAAACTCAATC
CGGTTGATCTTTTGAGTCCGCTTCAAGACAGGATAACTAGTGACCCAATCTTGGGGCTCTCTTGCGCCTATATTTTTTTCTGCTTAACTCTTATACATAG
AAAATGAGACTTAATATTTTGACTGCTAATTTTTATTTATATAAGCTGTTTTCTTTCACTCATATAACTATCTGATTTAGTTCATTAATCCGAATAATAA
ATATAAAAATGAGGATATCTATTCAATGCATTTCAACCCTTTTCTCGAAAAAAAGTGGGAGAAGTTTATGTCTCAACGAATCACACGTAGAGATATTGAT
AATACAC