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Detailed information on CNT30716591


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30531958Malus domestica goldenEucalyptus grandis27.184.3583.95162forward
CNT30730237Malus domestica goldenCorchorus capsularis22.3214.1881.95133reverse complement
CNT30569543Malus domestica goldenActinidia chinensis35.744.4582.63213forward
CNT30152193Malus domestica goldenPrunus persica102.681486.11612forward
CNT3038463Malus domestica goldenCucumis melo26.6831.3684.28159forward

Expression of CNT30716591

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MTVKLNTVDLLNPFQVRMTNQPILGEPVSSVCVYFHLTL*

Sequence

>CNT30716591
TTTTTTTTTTCAGTTCCTATTCTTCTTTCTATTTCTGAGAAAAAGGGCTTTCAAAATAAAGTAAAGGATTAATTCGTTTCGAATAATTATTTATTAAATT
GGTGGACAGGAGTATACTTTGGATTGGAATCGTGTCATGAAGAGTATTGCCGGATCATTTCTACTAACTTGAAGCCCCAATTAGTATTCTTTGTTTGTAT
ATTATGTAAAAATGTCGTTTTTCTCCATTACTAATCCTTTACATATGTTGTGTTTTTGACCATCCACTCATTTTTGCTCAATTCCCCATTATGCTAATAC
ATAAAAATGACAGTGAAACTCAATACGGTTGATCTTTTGAACCCGTTTCAAGTCAGGATGACTAATCAACCAATCTTAGGGGAACCAGTGTCTTCTGTTT
GTGTTTATTTCCACTTAACTCTCTAACTCTTATACATAGAAAATGAGAATCAATCTTTTTACTGCAAATTTATATATAAGTTGTTTTCTTTCACTCATAT
AACTATTTGATTTAGTTTATCGACCTGAATAATGAATAAACAAAATTAAGATATCTACTCAATCCATTCCAACCCTTTCCTTGAAATGAAGGAATA