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Detailed information on CNT30380091


BLAST search results

BLAST vs Swiss-Prot:
sp|O49169|EF1A_MANES, E-value = 9e-174

BLAST vs NONCODE:
NONMEST004097, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30355521Manihot esculentaLactuca sativa50.2489.4183.35853forward

Expression of CNT30380091

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MPRSINDSAVVLGGLKLPQGNINGDTTFTLSLELVKNPGILE*

>peptide 2 (51 aa)
MMMTCDVKLAASLAGSSLEFDATNPLFRSFTATFFTLNPTLSPGRASWRAS*

>peptide 3 (53 aa)
MGLVGIIFTNPASPFFKNLGSFSSSLPDLRSILVKISANFTAMWEVWQSSTGA*

>peptide 4 (42 aa)
MVIPRSRSALSLSRTQAYLNDLLFISAASFSNLSITRLSIPPS

>peptide 5 (48 aa)
MSLTANLPSGGLHNHGLGRNHLHEPSITIFQKLGLLLKLFARPTINLG*

>peptide 6 (54 aa)
MMHLNRLNFSCQTSRSEGHNHSRLQDTSFHTTHWDSSNTTNLVNILKWETERLV*

Sequence

>CNT30380091
GCAACTACCAATCTCAGACATGGCTAAATAACTGAACAGAAACAAAACTACACGATAAATAAAAAACTCCACGCAGTATCAAAAGAAACTACGAACCCTG
CGTTCACTTTCCTCCCTTCTTGGCGGCAGACTTGGTCACTTTAGCTCCACTTGGGTCCTTCTTCTCAACACTCTTGATCACACCAACAGCAACAGTCTGG
CGCATGTCCCTAACAGCGAATCTACCCAGTGGAGGTCTCCACAACCATGGGCTTGGTCGGAATCATCTTCACGAACCCAGCATCACCATTTTTCAAAAAC
TTGGGCTCCTTCTCAAGCTCTTTGCCAGACCTACGATCAATCTTGGTTAAGATTTCAGCAAACTTCACAGCAATGTGGGAGGTGTGGCAATCCAGCACTG
GGGCATAACCATTTCCAATCTGACCAGGGTGGTTCATGATGATGACCTGCGATGTAAAGTTGGCAGCCTCCTTGGCAGGATCATCCTTAGAGTTTGATGC
AACAAATCCTCTCTTCAGATCTTTCACTGCAACGTTCTTCACGTTGAACCCAACATTGTCACCAGGGAGGGCCTCCTGGAGAGCCTCATGATGCATCTCA
ACAGACTTAACTTCAGTTGTCAGACCAGTAGGTCCGAAGGTCACAACCATTCCAGGCTTCAGGACACCAGTTTCCACACGACCCACTGGGACAGTTCCAA
TACCACCAATCTTGTAAACATCCTGAAGTGGGAGACGGAGAGGCTTGTCTGAGGGCCTCTTGGGCTCCTGGATCTGGTCCAGAGCTTCAAGAAGAGTTGG
GCCCTTGTACCAGTCAAGGTTGGTTGATCTCTCAATCATATTGTCACCTTCAAACCCAGAGATGGGAACAAAAGGAATCTTATCAGGGTTGTATCCAACC
TTCTTGAGGTAGGAGGAGACTTCCTTGACAATTTCATCGTACCTAGCCTTGGAGTACTTGGGGGTGGTGGCATCCATCTACAGAGACATTAAAAAACAAT
AAGTGCGACAAAAAATTGATCTCAAAGCACATATACATATAGAACTTAACAATACTAATACTTATATTTCCCAAATAACAGCAACCTCATATCAATATAA
CCTCTCTCCTGGACAGATAAGATCCAAGCATATCATTTACAATCAGCCATCGTGATCCTAAACAACTAGAATTTTACAGCCAACAATCACTCAACCTCTC
AGCATTGCATTCTTAACACATTGCTCCTATCTTTTCATTTTTCAACAAAATTATGAATAGGAGGATAACATTCAGCACCAACACGAATGCACAGCCAAAG
CCAGCAAGTAATTAGGTTGTTACCTTGTTGCAGCAGCAAATCATTTGTTTGACACCAAGGGTAAAAGCAAGAAGGGCGTGCTCACGGGTTTGACCATCCT
TGGAAATACCAGCTTCAAAACCACCAGTGGTGGAATCAATAATAAGGACAGCACAGTCAGCCTGTGAGGTACCAGTAATCATATTCTTAATAAAGTCACG
ATGCCCAGGAGCATCAATGACAGTGCAGTAGTACTTGGTGGTCTCAAACTTCCACAAGGCAATATCAATGGTGATACCACGTTCACGCTCAGCCTTGAGC
TTGTCAAGAACCCAGGCATACTTGAATGACCTCTTGTTCATCTCAGCAGCTTCCTTCTCAAACCTCTCAATCACACGCTTGTCAATACCTCCAAGCTT