Detailed information on CNT30379354


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30334668Manihot esculentaCynara cardunculus20.4610.4490.3262forward

Expression of CNT30379354

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MREAGFTELRLPLAPSSGRITGWCHPGPYG*

>peptide 2 (38 aa)
MAGSGLANFWLARSKLRVKPWDLGEGLGLLVPRAGCNA*

>peptide 3 (30 aa)
LSSVTWACNPSGGFEVLGRCLSPYGRIRLG*

Sequence

>CNT30379354
GCTGAGCTCAGTAACGTGGGCTTGTAACCCAAGTGGGGGCTTTGAGGTGTTGGGACGTTGTTTGAGCCCTTATGGCAGGATCAGGCTTGGCTAATTTCTG
GCTTGCCCGTTCCAAGCTGAGAGTTAAACCATGGGACCTGGGCGAAGGCTTGGGTCTCCTAGTTCCTAGAGCAGGGTGTAATGCGTGAGGCTGGCTTCAC
AGAGCTGCGATTACCTCTCGCTCCCAGCAGTGGAAGGATAACAGGTTGGTGCCATCCTGGTCCATATGGCTAGATGGGCTGTGCTAACTGGACCATCACT
TTT