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Detailed information on CNT30377557


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FH97|EPS1_ARATH, E-value = 6e-132

BLAST vs NONCODE:
NONATHT004038, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3081494Arabidopsis thalianaBrassica juncea20.6253.4383.96187forward

Expression of CNT30377557

Peptides detected in this lncRNA

>peptide 1 (31 aa)
IINLSSKFDGIFYRARRNVATPAASVSDSVQ*

>peptide 2 (34 aa)
LSTYRRSLMEFFTELDGMLQPQRRVFPIPFSKQA*

Sequence

>CNT30377557
ATTATCAACCTATCGTCGAAGTTTGATGGAATTTTTTACAGAGCTCGACGGAATGTTGCAACCCCAGCGGCGAGTGTTTCCGATTCCGTTCAGTAAACAA
GCCTGAAAATCAAGACTTGCTTCTCCAATTCCTTTGAAAACAACGAGTCTTCCATTGAGATACGGTGGTCCAGCTCTTGCAGCTATCGGTTTACCCCAAC
CGAAATCATTACAGTACACATCGAACCGCCCAGCCTAGTCCATGGTCCAGCAGCTCTCCAACCGTGACCGTAGCTATCCCGGTTTGGCTTACATTCCCAA
AACACTCTTCTTCTAGTGGCGGATTTAGCCGTTGCCTCATGTTTATAGGGTCTGGAATATGGATTGGATAATCAATCTCGTCAAAGAACCAACCTTTAAG
GTGAAGACGACGTTGGAAAGTTTGGGATCCTGAAGAATCTTTCGAGCAAATCTCTGACCATGCATTGATGAACTTCCAGATTGAAGTGGCATCAGCCACG
GTAGAGTTGTAACCAAAACCGATGAAAACCCCGTCCTTCATCTCTGTCACTTGAACCATAAGTAGAGATCTTGAGACACCGTGGTAGTTCTTGATCCCCG
TTGCAGGGAAAAAGGAAGCGAAAAACCCGGGGACAGAACCGGATAACTCAAGGACATCACTGAGCTCGATGTTTTTAGCCACTGCGTGAACAAACTCCAC
ACCTGAACCATCGCAGCTGATGAAAAACGAGACAGTATCGTCGTCGTTCTTTAGCTTCACAAGACGACCAGCTAAAGGATAGAAACGATCAAGTGCAACA
GAGAGTGAAGCTTGTAATTGTTTGACTTCAATTTTGTGAAAGAGAAGACCTCTTTGAAGATAACCAAAACGAAGGCGAGAGAGATCCCATGGAGTCAGCT
GAATCTT