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Detailed information on CNT30371589


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SEZ3|CDF5_ARATH, E-value = 4e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30310213Arabidopsis thalianaCamelina sativa82.6388.0987.92414forward

Expression of CNT30371589

Peptides detected in this lncRNA

>peptide 1 (56 aa)
KYLCLCTTVNTISTLSSKQQNYLHSFAFFHKGLLVDCEKFRRPSYFCCCFPLCQIH*

Sequence

>CNT30371589
AAAAATATCTCTGTTTGTGTACAACAGTAAATACTATATCTACTCTTAGTTCCAAACAACAAAACTATCTACACAGCTTTGCCTTCTTCCACAAGGGTTT
GCTTGTAGACTGTGAGAAGTTTCGGAGACCAAGCTACTTCTGTTGCTGTTTCCCTTTGTGTCAAATCCATTGAACAAACTGAATCCTTGCGTTTTTTTCT
CGGGTTTTGTCGGTAACTTAGACCACACAGCGCTCTTACTAGCTTCGATATTCATTCTAAGAGATTCTGAGACCAATCTTGCTCTTGTAGTAGTTATTGT
TGTATTAGTATCATTGATTCTTCCTTCAGTTTGATCTCTTGACCGTTTTCCTAAACATGATGAAGTCTCTGAGGTAGGGTATATCGGAACCGTGCATCCC
CAGTAGAAGGGGACAGGGTAGAAACTAGCGTTAGGACCCGTTGGACTCCATTGGTAAGGCCAAGGAGAAGAATTATTAGGTAACATTACTTGCGGAGGAA
G