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Detailed information on CNT30368410


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577250Sorghum bicolorOryza barthii15.5420.6481.62136forward

Expression of CNT30368410

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MSYVICFLLVSKDPSRHSSNISDVTPKKFSSPI*

>peptide 2 (51 aa)
MDVAHPIAHFILWGGLSMCRMELATRMASAGASPVSLAPSSPSLDVSFLPS*

Sequence

>CNT30368410
ATTGGATATAGACTACATAGTATCTATTATGTCTATTTTAGAAAATAAACAAAGAGCAAAACATATAATTCAATATAAATAATTCTTTACTAGTCAGATG
TATTAAACAATATATATTTTAAAATTCTAGCTCGTGGGAATGTTTTTCTCTTAGGCCCTGTTTTGCTACCCAAAATTTTTTCATCCATCCCATCGAATCT
TTGGACACATGCATGGAACATTAAATGTACATAAAAAAATAAACTAATTACACAGTTTGGTTAAAAATCGCGAGACGAATCTTTTAAGCCTAGTTACTCT
ATGATTAGCCTTAAGTGCTACAGTAACTCACATGTGCTAATGACAGATTAATTATGCTTAATAGATTTGTCTTGCAGTTTCCTGATGAGCTATGTAATTT
GTTTTTTATTAGTTTCTAAAGACCCCTCCCGACATTCTTCCAACATATCCGATGTGACACCCAAAAAATTTTCATCCCCAATCTAAACAGGGCCTTAATT
GAAAGATAGAGAGCTCCTGCCACTTTGTTAAAAAAAAAGTAAGTGGAAATATACCATCACGGTCACCACCCATCCAAGAACAGAACTTAATGAGAGGAAC
ATCGTAGGGAAGGCGCTCATTGATGCCGATATTCTTCAGGGCTGTATCCACACGGCGCAAAAACTTAGGCACACCGTTCCATACAGTTTCATGGATGTAG
CTCATCCCATAGCGCATTTCATCCTGTGGGGTGGGTTGAGCATGTGCAGGATGGAGCTCGCCACCAGGATGGCGTCGGCGGGGGCCAGCCCCGTCAGCTT
GGCTCCCAGCTCCCCCAGCTTGGACGTGTCTTTCTTGCCCTCGTAGTCGGCCGACACCTCGTAGCACTCCTGGAC