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Detailed information on CNT30366637


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675770Sorghum bicolorSetaria viridis16.2320.7498.3962forward
CNT30117377Sorghum bicolorOryza nivara15.9729.998.3661forward

Expression of CNT30366637

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MYIPAVSLLSPLSLHTMHYKLQQTRSESIPSRSINNTHHTN*

>peptide 2 (45 aa)
MDHILHDLDIYHRLREGLDDGVVPWVRQVLQQVVEGPNGSKPLSPG

Sequence

>CNT30366637
TGAGGATACTGATCAAACAATCTTACCCTTAGCCCTCCCCTTGGATTAATGTACATACCAGCAGTGTCACTCCTCAGCCCTCTCTCTCTTCATACCATGC
ATTACAAGTTACAACAAACCCGGTCCGAATCTATACCCTCCAGATCGATTAACAACACACATCACACAAACTGATCCAGAAAGGAATTAACATCGACGAC
CGCGCTTCAATGTTTGCCTTCCAGTCCCCATCAGCTCGCTAGCGATGGATCACATTTTACATGACCTGGATATATATCATCGACTAAGAGAGGGTCTGGA
TGATGGTGTTGTGCCATGGGTCAGACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCAACGGGTCGAAGCCATTGTCACCCGGC