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Detailed information on CNT30363985


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674420Sorghum bicolorSetaria viridis29.0635.0893.7127forward

Expression of CNT30363985

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MNLLPPFFRSRLMVIMPGLKSKFSLTILRISLSGMLPVPYESTNTDRGEEEALSRHCFLLLGR*

Sequence

>CNT30363985
GGAGAAATGTGAACTTGTAATTGCGCTTGGTTACACAGGGGGCACCTAAAGGGTAACAGTAACATACGAATATTGATAGATTAAAAACTGCAAATCTCTC
AGCAGTTTCAGTACAGACTCGAAAAGGGGAAGAAAAAAAAATACTGGACGACCAAACTAAAAGATAAAGATCAGCGCATAATCCTGGTTGCTGCCACACC
AAATTATACCAATCCCTAAGCCGGCGGCGGTCTTGATGAACCTGTTGCCGCCTTTCTTCAGGTCGAGGTTGATGGTGATCATGCCGGGCCTGAAGTCGAA
GTTCTCCTTGACGATCTTGAGGATCTCCTTGTCCGGGATGCTCCCGGTGCCGTACGAGTCGACGAACACGGACAGGGGTGAAGAGGAAGCTCTCAGCCGC
CATTGCTTTCTTCTTCTCGGGCGATAAATTAACCTCT