Detailed information on CNT30674420


BLAST search results

BLAST vs Swiss-Prot:
sp|P50299|METK1_HORVU, E-value = 5e-40

BLAST vs NONCODE:
NONPOPT001948, E-value = 1e-15

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522677Setaria viridisSetaria italica69.0628.18100250forward
CNT30188823Setaria viridisSecale cereale55.823.8290.59202forward
CNT30363985Setaria viridisSorghum bicolor35.0829.0693.7127forward

Expression of CNT30674420

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MNLLPPFLRSRLMVIIPGLKSKFSFTILRISLSGILPVPFLRTSVRRAPSL

Sequence

>CNT30674420
ACTCACTGATCAGACACACATCCACGAGCAGGAGCAGCAGCAGCAGCAGTGCTTGCGGGTAACATCAGCAGCAAGAGGTAGATGATAAGCACGGAGACGG
ACACTCTTCTTCTCTAAGCGGACGCCTTGTCGAACTTGAGGGGCTTCACCACCTCCCAGGTGAAGTCGGTGTCGTCGCGCCCGAAGTGACCGTAGGCCGC
GGTCTTGATGAACCTGTTGCCGCCCTTCTTGAGGTCGAGGTTGATGGTGATCATCCCGGGCCTGAAGTCGAAGTTCTCCTTCACGATCTTGAGGATCTCC
TTGTCGGGGATCTTGCCGGTGCCGTTCTTGCGGACCTCGGTGAGGCGCGCGCCGAGCTTGGT