Detailed information on CNT30363924


BLAST search results

BLAST vs Swiss-Prot:
sp|P09918|LOX3_PEA, E-value = 1e-09

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30440717Sorghum bicolorAegilops tauschii46.3524.4383.33108forward
CNT30454858Sorghum bicolorSaccharum spontaneum25.3222.8794.9259forward

Expression of CNT30363924

Peptides detected in this lncRNA

>peptide 1 (60 aa)
VVVVVQDVEPVAFQRLLHGEALQLVLEVRLRDGARVLRMLVAARDVSDYLSDHLRFYRRS*

>peptide 2 (42 aa)
MVLVCCACLLLPVMSPIIFPIIFGSTGGANCKLLLVPWSGSG*

Sequence

>CNT30363924
GTTGTCGTGGTGGTCCAGGATGTAGAGCCGGTTGCCTTCCAGCGCCTGCTGCACGGTGAGGCCCTCCAGCTTGTTCTCGAGGTGCGCCTCCGTGATGGTG
CTCGTGTGCTGCGCATGCTTGTTGCTGCCCGTGATGTCTCCGATTATCTTTCCGATCATCTTCGGTTCTACCGGCGGAGCTAACTGCAAACTGCTACTTG
TTCCTTGGAGTGGGAGTGGCTAGCAGCTGTGGG