Detailed information on CNT30360516


BLAST search results

BLAST vs Swiss-Prot:
sp|P34823|EF1A2_DAUCA, E-value = 5e-57

BLAST vs NONCODE:
NONMEST004097, E-value = 5e-42

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30482488Lactuca sativaChara braunii30.5814.4583.1589forward

Expression of CNT30360516

Peptides detected in this lncRNA

>peptide 1 (95 aa)
DNNLRSKVGSTLAWIVFRVRRNVSSLQIFHRHILHVEPDVVAGECFLESFMVHLNRLNFSCQTRWTESHEHRRFDDAGFNTTDWNSSDTTNLVHVL

>peptide 2 (96 aa)
MIITCEVKLAAPLHGSSFELDATYPRFRSFTDTFFTLNPTLSPGSASWRASWCISTDLTSVVKPDGPKVTSIVGLMTPVSTRPTGTVPIPPILYTS*

Sequence

>CNT30360516
ATGATAATAACTTGCGAAGTAAAGTTGGCAGCACCCTTGCATGGATCGTCTTTCGAGTTAGACGCAACGTATCCTCGCTTCAGATCTTTCACAGACACAT
TCTTCACGTTGAACCCGACGTTGTCGCCGGGGAGTGCTTCCTGGAGAGCTTCATGGTGCATCTCAACAGACTTAACTTCAGTTGTCAAACCAGATGGACC
GAAAGTCACGAGCATCGTCGGTTTGATGACGCCGGTTTCAACACGACCGACTGGAACAGTTCCGATACCACCAATCTTGTACACGTCCTGA