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Detailed information on CNT30355498


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONGMAT000502, E-value = 2e-91

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30169886Lactuca sativaPistacia vera68.8866.2482.571142forward

Expression of CNT30355498

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MERRFLLYIVIGESTAVFELFTGEDKTLLIWRDSFLVLYLRFHIVDRIGTLDFKSNRLTG*

>peptide 2 (31 aa)
MVSELSTSKVIVFPVRVLTKICIPPRRRRTR*

Sequence

>CNT30355498
AATACTAATCCAGAAATTTTCCCTAATTACCTATCCGAAAATAGTCAAAGAAAAGATTTTAGTTTTCGATAATCTAAAATTATAACACGATAATATCATC
TATTTCAAACACCAAACACATCAAGCAACGAAAACGAAAACAGGGTAAAATCGTTCCAACACAAATTCATACTTTTATTATATTATAGTATCCCACTAAA
ATCAGTCAACACCCATAATCAAATGAACACCAACAGAGCTATCTAGTTCAACTTACGGAGATCACCACCACGAAGACGAAGAACAAGGTGCAAAGTGGAC
TCCTTCTGGATGTTATAATCAGCCAAAGTTCGCCCATCTTCCAATTGCTTCCCGGCGAAGATCAATCGCTGTTGATCCGGTGGAATCCCCTCCTTATCCT
GGATTTTAGCCTTCACGTTATCGATAGTATCAGAGCTTTCCACCTCCAGAGTTATAGTTTTACCCGTTAAAGTCTTCACAAAGATCTGCATACCACCGCG
CAGACGAAGAACCAGGTGGAGAGTCGACTCCTTCTGGATGTTATAGTCTGCAAGTGTTCGCCCATCCTCCAGTTGTTTTCCGGCGAAGATCAATCGCTGT
TGATCCGGTGGGATCCCCTCCTTATCCTGGATTTTAGCCTTCACGTTATCGATAGTATCAGAGCTTTCCACCTCCAGCGTTATAGTTTTACCCGTTAAAG
TCTTCACGAAGATCTGCATACCACCGCGCAGACGAAGAACCAGGTGGAGAGTCGACTCCTTCTGGATGTTATAGTCTGCAAGTGTTCGCCCATCCTCCAG
TTGTTTTCCGGCGAAGATCAATCGCTGTTGATCCGGTGGAATCCCCTCCTTATCTTGAATTTTGGTTTTAACGTTATCGATGGTGTCGGAGCTCTCAACC
TCCAAGGTGATCGTCTTCCCGGTGAGGGTTTTAACGAAGATCTGCATACCTCCACGAAGACGGAGGACGAGATGAAGCGTTGACTCCTTTTGGATGTTGT
AGTCGGCGAGGGTACGGCCGTCCTCAAGCTGTTTACCGGCGAAGATGAGACGCTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGAATCTTCGTCTTCAC
GTTGTCGATTGTATCAGAGCTCTCGACCTCCAACGTGATCGTCTTTCCGGTTAGGGTTTTGACGAAGATCTGCATGCCTCCACGAAGACGAAGAACAAGA
TGGAGCGTCGATTCCTTCTGTATATTGTAATCGGCGAGAGTACGGCCGTCTTCGAGCTGTTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGGATTC
CTTCCTTGTCCTGTATCTTCGTTTTCACATTGTCGATCGTATCGGAACTCTCGACTTCAAGAGTAATCGTCTTACCGGTTAGGGTTTTCACAAAGATCTG
CATCTATATTCAGAATAACAACGAATCAAAACTTCGAACCAATATAATTCGCATAATCGACTAGGATTCTTGAATATAAACTGGAAATTTTACTTCTATA
AAGAAATCATGATTTACCTTCTGATCAAAAAAGATTGAATGCAACGATGAACTTGAGAAATTGTTATTTGCTTGGGATTTGGATGATATTGTGAATTTTG
GGGACCAAGAAAATCTCTATTTATAACCGCCTTTGAGGAAGGTTTCTTTGTTCTCGAG