CANTATAdb - search

Detailed information on CNT30355018

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30727661	Lactuca sativa	Corchorus capsularis	82.34	77.48	77.73	485	forward

Expression of CNT30355018

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MVMLGCRKERSGCKRVRLGCRMVMSGCRKERSGCKPERSGCKLAM*

Sequence

>CNT30355018
ATTGGTACCTGTAGTTGGGGGATGTAGGGCTGTATGGACTACTAGGAGAATAAGCCAACGAGGGGCTGTACTTAGCGGATGAAGGGTTGTAACTTGGTGA
GGTGGGACTGTAACTTGGAGAAGTAGGACTGTAGCTTGGGGAAGTAGGACTGTACCCAGGTGAAGTTGGGCTGTAAGCAGGGGAGGTTGGGCTGTAGGAA
GGGGAGGTCGGGCTGTAGGATGGTGATGTTGGGCTGTAGGAAGGAGAGGTCGGGCTGTAAGAGGGTGAGGTTGGGCTGTAGGATGGTGATGTCGGGCTGT
AGGAAGGAGAGGTCGGGCTGTAAGCCGGAGAGGTCGGGCTGTAAGCTGGCGATGTAGGGCTGTAGCTAGGTGATGTGGGTGAGTAGCTTGGTGAGGTAGG
GGAGTAGCTAGGTGAAGTGGGTGAGTAGGTAGGACTTGTTGGGCTATAACCGGGTGAACTTGGGCTGTAAGTTGGAGAGGTGGGACTGTAACCCGGAGAT
GTAGGGCTATAGCCCGGTGAGGTTGGGCTATAACCAGGCGAGGTGGGGCTGTATCCCGGAGATGATGGGCTGTACCCGGGGGACGACGG