Detailed information on CNT30354988


BLAST search results

BLAST vs Swiss-Prot:
sp|P25776|ORYA_ORYSJ, E-value = 3e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30711381Lactuca sativaGlycine max29.5214.3183.7580forward
CNT3033018Lactuca sativaTheobroma cacao25.097.8286.7668forward

Expression of CNT30354988

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MLPLLFHIYQLFLLYFFPFLCNLLHPSPQPMSFSL

>peptide 2 (36 aa)
AASPRKASAMVVIDTATRGALRTSGILIADDFRFDR*

>peptide 3 (34 aa)
GSIPTQSKRHGSYRHSNTWCFEDKWHIDRRRFQV*

Sequence

>CNT30354988
GGGCAGCATCCCCACGCAAAGCAAGCGCCATGGTAGTTATAGACACAGCAACACGTGGTGCTTTGAGGACAAGTGGCATATTGATCGCAGACGATTTCAG
GTTTGACCGGTGAAGGTGGTGATGGACCAGGGTTAGGTGGATTTTGACCGTTTTTAATCGGGTAAGATGCTTCCATTGCTATTCCACATTTACCAACTTT
TTCTTTTATATTTCTTTCCATTCTTATGTAACCTTCTTCACCCCAGTCCGCAGCCCATGAGTTTCTCACTA