Detailed information on CNT30350131


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553965Eragrostis tefOryza glaberrima23.4811.3494.4454forward
CNT30108437Eragrostis tefOryza longistaminata29.1311.3991.0467forward
CNT30322766Eragrostis tefAsparagus officinalis25.657.4991.5359forward

Expression of CNT30350131

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MMTMATEDATESASDPITPSWKPAVIVTSWYCCALLS

>peptide 2 (39 aa)
ATWRVQKVTIRCQLVNVVAAKARNNTIQHHYQYTNLAHA*

>peptide 3 (44 aa)
PHGGCRRSPSDASLLMLLLQRPETIQFNIIISIQIWRMHDDNGN*

Sequence

>CNT30350131
TGCCACATGGAGGGTGCAGAAGGTCACCATCAGATGCCAGCTTGTTAATGTTGTTGCTGCAAAGGCCAGAAACAATACAATTCAACATCATTATCAGTAT
ACAAATTTGGCGCATGCATGATGACAATGGCAACTGAAGATGCAACGGAGAGTGCAAGTGACCCGATCACACCAAGCTGGAAACCAGCTGTCATAGTGAC
CAGCTGGTATTGCTGTGCTTTGCTGAGTTC