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Detailed information on CNT30322766


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553965Asparagus officinalisOryza glaberrima22.9738.0381.22181forward
CNT30350131Asparagus officinalisEragrostis tef7.4925.6591.5359forward
CNT30108437Asparagus officinalisOryza longistaminata22.2129.7680.57175forward

Expression of CNT30322766

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MELNPRLRLRSPIEVPLSTPNRRTVLPSIDLGSKNRRRCATCRVQKVTIRCQLVSVVAVYVCKAYT*

>peptide 2 (39 aa)
MMPLIEPMIQPHPADILSPQTTSSCSSSSSSLRPQVQAKA

>peptide 3 (36 aa)
MSMKVAVRPCNSTAMYFLDPVIIHKPRTGGKMQQRA*

>peptide 4 (36 aa)
MFRLFHAPIERGMKRQTEREAKRAHESLVADDNGNG*

Sequence

>CNT30322766
GGTAGAATCCAATGGAGTTGAACCCGAGACTGAGATTGAGGAGTCCAATTGAAGTTCCATTGAGCACACCAAATAGAAGGACCGTTTTGCCATCAATCGA
CTTGGGTTCAAAAAATCGCAGGCGTTGTGCCACGTGCAGAGTGCAGAAGGTTACCATCAGATGCCAGCTTGTTAGTGTTGTTGCTGTTTACGTATGCAAA
GCATACACATAGATATACGTGAGAAAGAAATGTCAAGCAGTAATTTTAACCGCTTACAGAAAATGCTGGGGGTCCAGTAAGAGTCAAAAATATTAGGTTT
AACCTTTAGTTAAGTTACTAGCTTATAGAATATGCAAATTCAAGTCCCAGGAAACATTCAGCTGTTAAATACAAGATGAACGATATAAATGGTCATAGAT
TCATCCCTAGGAAATTGTGTTCATGAGTATGAAGGTGGCCGTTAGACCCTGCAATTCTACTGCAATGTATTTTCTAGATCCAGTTATTATTCACAAGCCA
CGCACAGGTGGCAAAATGCAACAGCGGGCGTGAGTCGCTCTAATTTGAGCTAGTTGCGGATGTTTAGACTATTTCATGCTCCAATCGAGAGAGGTATGAA
GAGACAAACCGAAAGGGAAGCCAAGAGAGCTCATGAGAGCCTTGTTGCAGATGACAATGGCAACGGATGATGCCACTGATAGAGCCAATGATCCAACCAC
ACCCAGCTGACATCCTGAGCCCTCAGACGACATCTTCTTGTTCTTCTTCTTCTTCCTCCCTGAGGCCGCAAGTTCAAGCAAAAGCTGC