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Detailed information on CNT30347973


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SQL2|CB24_PEA, E-value = 4e-70

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300691Eragrostis tefTriticum aestivum25.1815.2995.62137forward

Expression of CNT30347973

Peptides detected in this lncRNA

>peptide 1 (72 aa)
PGCCTYNLHQSTKVNSAGESLDDGVVPRVGQVLQQVVEWALAGDVVLDEEPQERKHRQPPCKNQSRDKRVDD*

>peptide 2 (52 aa)
MGPALVSTSGISIPATPSIAHRPFTSSACTNHRRFSGSSARPSGSKPLSPGRL

>peptide 3 (48 aa)
MMVLCHGSDRCCSRLSNGPLPVTLCWMRNPRNASIASLPARINHGTNE*

Sequence

>CNT30347973
CCGGGGTGTTGCACGTATAATTTACATCAGTCCACAAAAGTGAACTCAGCTGGAGAGAGTCTGGATGATGGTGTTGTGCCACGGGTCGGACAGGTGCTGC
AGCAGGTTGTCGAATGGGCCCTTGCCGGTGACGTTGTGCTGGATGAGGAACCCCAGGAACGCAAGCATCGCCAGCCTCCCTGCAAGAATCAATCACGGGA
CAAACGAGTAGATGATTAGTGACATTCCAGAGAAGGAAATCGAGTGATTGATCGGCCGGGAAGTACGCTACTCACCGTTGGCGAGCTCCTTCTCCTTGGC
CTCGAGCGTGGGCGCGAAGTTGAGCGGGTTGAAGACGCTGCCCGGGTAGCCGCACTCGTGCGGCGGCAGGCTGTAGCTCTTGAAGATGGGGCCGGCCTTG
GTCAGCACCTCCGGGATCAGCATCCCGGCCACGCCCAGCATCGCCCACCGCCCGTTCACCAGCTCCGCCTGCACGAACCACCGCAGGTTCTCCGGGTCCT
CCGCCAGGCCCAGCGGGTCGAAACCGTTGTCGCCGGGAAGGCTG