« Back to Eragrostis tef search


Detailed information on CNT30345526


BLAST search results

BLAST vs Swiss-Prot:
sp|P13851|CB21_SINAL, E-value = 3e-65

BLAST vs NONCODE:
NONBNAT005173, E-value = 1e-59

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30684689Eragrostis tefTriticum urartu58.4836.5493.67300forward

Expression of CNT30345526

Peptides detected in this lncRNA

>peptide 1 (74 aa)
FIESFIRPIQNMSTNTHYWYNLPSACSILQYSYTHRYNSTYEYVRRLRYTRHPSFTLLLTCRGRSWWRRTMRCC*

>peptide 2 (29 aa)
MAHRQWITSSSRFLAKVSGSAERPAVSHP*

Sequence

>CNT30345526
ATTTATTGAGTCATTCATCAGGCCCATCCAGAACATGAGCACAAATACACACTACTGGTACAATCTCCCATCGGCGTGCTCCATTTTACAGTACTCGTAC
ACCCACAGGTACAATAGTACATACGAATACGTACGTCGACTACGGTACACACGACATCCCAGCTTCACCTTGCTGCTCACTTGCCGGGGACGAAGTTGGT
GGCGTAGGACCATGCGTTGTTGTTGACGGGGTCGGCGAGGTAGTCCAGCCCGCCCTCGCTGAAGATCTGGGACCCGGCCTTGAACCACACGGCCTCGCCG
AACTTGACGCCGTTGCGGGCCAGCAGCTCGGGGAAGACGCAGCCCAGCGCGCCCAGCATGGCCCACCGGCAGTGGATCACCTCCAGCTCCCGGTTCTTGG
CGAAGGTCTCGGGGTCGGCGGAGAGGCCGGCCGTGTCCCACCCGTAGTCGCCGGGGAACTCGCCGGTCAGGTAGCTCGGGGGCTCGCCGGAGAAGGGGCC
CAGGTACTTGACG