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Detailed information on CNT30684689


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 8e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30297978Triticum urartuTriticum aestivum63.793.0698.47523forward
CNT30721831Triticum urartuTriticum spelta68.096698.21559forward
CNT30345526Triticum urartuEragrostis tef36.5458.4893.67300forward
CNT30604596Triticum urartuOryza punctata49.4552.1288.42406forward

Expression of CNT30684689

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFCFG*

>peptide 2 (31 aa)
RVSERQVVKQKNRDALIDLKNNQIHYTNTIL*

>peptide 3 (35 aa)
MQHLSVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 4 (29 aa)
MAQRQWMTSSSRFLAKVSGSADSPAVSQP*

Sequence

>CNT30684689
TCAGAGTTTCAGAGAGACAAGTAGTTAAGCAGAAGAACAGAGATGCCTTGATTGATCTGAAAAATAACCAGATACATTACACAAACACCATCTTGTAGTG
TACACACACCAACTCCTCATCTCGACTCGCCCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGA
CACACATGCAGCAGCATCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGACTGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGG
CGTTGTTGTTGACGGGGTCGGCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCAGACGGCCTCGCCGAACTTGACGCCGTT
GCGGGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATGACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGG
TCGGCGGACAGCCCCGCGGTGTCCCAGCCGTAGTCACCGGGGAACTCGCCGGTGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCG
CCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGA
GGAGAGCGCCATGGTCGCGGCCGCCATCGCGCGCTGCGTGCTAGCTGGCTTTTGCTTCGGGTGAGCTGAGGCTGGCAGTGGGAGGCGCTGGTGGTCGTTG
GTGCTGTGGAGTGAAGCGGGA