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Detailed information on CNT30329931


BLAST search results

BLAST vs Swiss-Prot:
sp|O24370|LOX21_SOLTU, E-value = 3e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30594688Dioscorea rotundataEragrostis curvula14.4328.6283.5385forward

Expression of CNT30329931

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MMVHRIPIKSSSVSSFGHHGSSFFSGCPFTLLNRQLQPVLCV

>peptide 2 (62 aa)
MESTSSAPSPASPRTSRTPHCPHPPTPPPAFSPARSSACSGSIQRSGTAQSSPPRGARTPPR*

Sequence

>CNT30329931
TTCAGATGGAGATGCTATTGGGGATCCCCATGCCGGTGACTCCAGGCTCTGAGAACGGCTTCAATAGTTCATAAGGCACTATCCCGGCGCCGCACCGGTT
CCTCAGCTCTTGGTTAGCATTCCTGGCGTCAACGATCCCCTCGATCACTTTCGCCGCCTTTATCTCAACGTTCTCCGCCCACGACGCCTCCAACTCCCCT
CCCAGGTACTCCTCATCCGGCGCATGGTTCGACAGTATATCCAATATCGACATCACCACCGTCGCCTGTATTTGTGATGGAAAGCACTTCATCAGCGCCG
TCTCCGGCTTCTCCCAGAACTTCTCGAACTCCCCACTGTCCCCATCCTCCAACGCCTCCACCGGCATTCTCACCCGCGCGATCGTCGGCCTGTTCGGGAA
GTATCCAGCGTAGTGGTACTGCCCAAAGTTCACCGCCGCGTGGTGCCCGGACGCCACCCAGATGATGGTGCACAGAATTCCGATCAAGTCCTCCTCCGTC
TCCAGCTTCGGCCACCATGGCTCGTCCTTCTTTTCGGGGTGCCCCTTCACACTCCTCAATCGTCAACTTCAGCCCGTGCTCTGCGTTCG